Gene : VIT_212s0059g01150 V. vinifera v2.1
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  497
Name:  ? VIT_212s0059g01150 Secondary Identifier:  ? PAC:38042746
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera CAROTENOID-PWY Vitis vinifera pathologic  
Vvinifera PWY-5943 Vitis vinifera pathologic  
Vvinifera PWY-5947 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_212s0059g01150 0.5kb upstream 0.5kb upstream 5605 true chr12: 6086943-6092547 Vitis vinifera
VIT_212s0059g01150 0.5kb upstream 0.5kb upstream 500 false chr12: 6092048-6092547 Vitis vinifera
VIT_212s0059g01150 0.5kb downstream 0.5kb downstream 5605 true chr12: 6086443-6092047 Vitis vinifera
VIT_212s0059g01150 0.5kb downstream 0.5kb downstream 500 false chr12: 6086443-6086942 Vitis vinifera
VIT_212s0059g01150 1.0kb upstream 1.0kb upstream 6105 true chr12: 6086943-6093047 Vitis vinifera
VIT_212s0059g01150 1.0kb upstream 1.0kb upstream 1000 false chr12: 6092048-6093047 Vitis vinifera
VIT_212s0059g01150 1.0kb downstream 1.0kb downstream 6105 true chr12: 6085943-6092047 Vitis vinifera
VIT_212s0059g01150 1.0kb downstream 1.0kb downstream 1000 false chr12: 6085943-6086942 Vitis vinifera
VIT_212s0059g01150 2.0kb upstream 2.0kb upstream 7105 true chr12: 6086943-6094047 Vitis vinifera
VIT_212s0059g01150 2.0kb upstream 2.0kb upstream 2000 false chr12: 6092048-6094047 Vitis vinifera
VIT_212s0059g01150 2.0kb downstream 2.0kb downstream 7105 true chr12: 6084943-6092047 Vitis vinifera
VIT_212s0059g01150 2.0kb downstream 2.0kb downstream 2000 false chr12: 6084943-6086942 Vitis vinifera
VIT_212s0059g01150 5.0kb upstream 5.0kb upstream 10105 true chr12: 6086943-6097047 Vitis vinifera
VIT_212s0059g01150 5.0kb upstream 5.0kb upstream 5000 false chr12: 6092048-6097047 Vitis vinifera
VIT_212s0059g01150 5.0kb downstream 5.0kb downstream 10105 true chr12: 6081943-6092047 Vitis vinifera
VIT_212s0059g01150 5.0kb downstream 5.0kb downstream 5000 false chr12: 6081943-6086942 Vitis vinifera
VIT_212s0059g01150 10.0kb upstream 10.0kb upstream 15105 true chr12: 6086943-6102047 Vitis vinifera
VIT_212s0059g01150 10.0kb upstream 10.0kb upstream 10000 false chr12: 6092048-6102047 Vitis vinifera
VIT_212s0059g01150 10.0kb downstream 10.0kb downstream 15105 true chr12: 6076943-6092047 Vitis vinifera
VIT_212s0059g01150 10.0kb downstream 10.0kb downstream 10000 false chr12: 6076943-6086942 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain