PhytoMine: Gene 29986.t000031 R. communis v0.1

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
29986.t000031 0.5kb upstream	0.5kb	upstream	3927	true	29986: 184759-188685	Ricinus communis
29986.t000031 0.5kb upstream	0.5kb	upstream	500	false	29986: 188186-188685	Ricinus communis
29986.t000031 0.5kb downstream	0.5kb	downstream	3927	true	29986: 184259-188185	Ricinus communis
29986.t000031 0.5kb downstream	0.5kb	downstream	500	false	29986: 184259-184758	Ricinus communis
29986.t000031 1.0kb upstream	1.0kb	upstream	4427	true	29986: 184759-189185	Ricinus communis
29986.t000031 1.0kb upstream	1.0kb	upstream	1000	false	29986: 188186-189185	Ricinus communis
29986.t000031 1.0kb downstream	1.0kb	downstream	4427	true	29986: 183759-188185	Ricinus communis
29986.t000031 1.0kb downstream	1.0kb	downstream	1000	false	29986: 183759-184758	Ricinus communis
29986.t000031 2.0kb upstream	2.0kb	upstream	5427	true	29986: 184759-190185	Ricinus communis
29986.t000031 2.0kb upstream	2.0kb	upstream	2000	false	29986: 188186-190185	Ricinus communis
29986.t000031 2.0kb downstream	2.0kb	downstream	5427	true	29986: 182759-188185	Ricinus communis
29986.t000031 2.0kb downstream	2.0kb	downstream	2000	false	29986: 182759-184758	Ricinus communis
29986.t000031 5.0kb upstream	5.0kb	upstream	8427	true	29986: 184759-193185	Ricinus communis
29986.t000031 5.0kb upstream	5.0kb	upstream	5000	false	29986: 188186-193185	Ricinus communis
29986.t000031 5.0kb downstream	5.0kb	downstream	8427	true	29986: 179759-188185	Ricinus communis
29986.t000031 5.0kb downstream	5.0kb	downstream	5000	false	29986: 179759-184758	Ricinus communis
29986.t000031 10.0kb upstream	10.0kb	upstream	13427	true	29986: 184759-198185	Ricinus communis
29986.t000031 10.0kb upstream	10.0kb	upstream	10000	false	29986: 188186-198185	Ricinus communis
29986.t000031 10.0kb downstream	10.0kb	downstream	13427	true	29986: 174759-188185	Ricinus communis
29986.t000031 10.0kb downstream	10.0kb	downstream	10000	false	29986: 174759-184758	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122457390	5262	Malpighiales	View MSA
124238748	5268	Malvidae	View MSA
124061077	5270	Rosid	View MSA
123744478	5271	Pentapetalae	View MSA
122786506	5272	Eudicot	View MSA
122044667	5273	Angiosperm	View MSA
121349630	5274	Embryophyte	View MSA
123424423	5275	Viridiplantae	View MSA

Defline:	(1 of 1) K14859 - ribosome biogenesis protein SSF1/2 (SSF1_2)	Genomic Order:	31
Name:	29986.t000031	Secondary Identifier:	PAC:16815113

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Message:	---- Current page: ---- /phytomine/report.do?id=9006487 ---- Current query: ---- <query name="" model="genomic" view="Protein.ontologyAnnotations.ontologyTerm.identifier Protein.ontologyAnnotations.ontologyTerm.ontology.name Protein.ontologyAnnotations.subject.primaryIdentifier" longDescription=""><join path="Protein.ontologyAnnotations.ontologyTerm" style="OUTER"/><join path="Protein.ontologyAnnotations.ontologyTerm.ontology" style="OUTER"/><join path="Protein.ontologyAnnotations.subject" style="OUTER"/><constraint path="Protein.id" op="=" value="100885587"/></query>

Gene : 29986.t000031 R. communis v0.1

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain