Gene : Sobic.009G228300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21349//PTHR21349:SF0 - 50S RIBOSOMAL PROTEIN L21 // 39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL Genomic Order:  2357
Name:  ? Sobic.009G228300 Secondary Identifier:  ? PAC:37920573
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G228300 0.5kb upstream 0.5kb upstream 3612 true Chr09: 56934083-56937694 Sorghum bicolor
Sobic.009G228300 0.5kb upstream 0.5kb upstream 500 false Chr09: 56937195-56937694 Sorghum bicolor
Sobic.009G228300 0.5kb downstream 0.5kb downstream 3612 true Chr09: 56933583-56937194 Sorghum bicolor
Sobic.009G228300 0.5kb downstream 0.5kb downstream 500 false Chr09: 56933583-56934082 Sorghum bicolor
Sobic.009G228300 1.0kb upstream 1.0kb upstream 4112 true Chr09: 56934083-56938194 Sorghum bicolor
Sobic.009G228300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 56937195-56938194 Sorghum bicolor
Sobic.009G228300 1.0kb downstream 1.0kb downstream 4112 true Chr09: 56933083-56937194 Sorghum bicolor
Sobic.009G228300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 56933083-56934082 Sorghum bicolor
Sobic.009G228300 2.0kb upstream 2.0kb upstream 5112 true Chr09: 56934083-56939194 Sorghum bicolor
Sobic.009G228300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 56937195-56939194 Sorghum bicolor
Sobic.009G228300 2.0kb downstream 2.0kb downstream 5112 true Chr09: 56932083-56937194 Sorghum bicolor
Sobic.009G228300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 56932083-56934082 Sorghum bicolor
Sobic.009G228300 5.0kb upstream 5.0kb upstream 8112 true Chr09: 56934083-56942194 Sorghum bicolor
Sobic.009G228300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 56937195-56942194 Sorghum bicolor
Sobic.009G228300 5.0kb downstream 5.0kb downstream 8112 true Chr09: 56929083-56937194 Sorghum bicolor
Sobic.009G228300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 56929083-56934082 Sorghum bicolor
Sobic.009G228300 10.0kb upstream 10.0kb upstream 13112 true Chr09: 56934083-56947194 Sorghum bicolor
Sobic.009G228300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 56937195-56947194 Sorghum bicolor
Sobic.009G228300 10.0kb downstream 10.0kb downstream 13112 true Chr09: 56924083-56937194 Sorghum bicolor
Sobic.009G228300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 56924083-56934082 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181223 5267 Panicoideae View MSA
124576451 5269 Grass View MSA
122045710 5273 Angiosperm View MSA
121350514 5274 Embryophyte View MSA
123424430 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.177     High High
cufflinks 0.159       Low
cufflinks 0.279       Low
cufflinks 1.755        
cufflinks 6.171        
cufflinks 1.552        
cufflinks 3.962        
cufflinks 0.543       Low
cufflinks 3.628        
cufflinks 4.335        
cufflinks 7.539        
cufflinks 4.472        
cufflinks 1.658        
cufflinks 5.961        
cufflinks 2.314        
cufflinks 0.483       Low
cufflinks 4.635        
cufflinks 4.557        
cufflinks 0.331       Low
cufflinks 2.882        
cufflinks 10.365        
cufflinks 10.999       High
cufflinks 7.881        
cufflinks 7.894        
cufflinks 0.272       Low
cufflinks 0.095       Low
cufflinks 3.114        
cufflinks 7.645        
cufflinks 3.01        
cufflinks 5.036        

0 Strain