Gene : Sobic.009G127400 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  1312
Name:  ? Sobic.009G127400 Secondary Identifier:  ? PAC:37919020
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G127400 0.5kb upstream 0.5kb upstream 5182 true Chr09: 48103727-48108908 Sorghum bicolor
Sobic.009G127400 0.5kb upstream 0.5kb upstream 500 false Chr09: 48103727-48104226 Sorghum bicolor
Sobic.009G127400 0.5kb downstream 0.5kb downstream 5182 true Chr09: 48104227-48109408 Sorghum bicolor
Sobic.009G127400 0.5kb downstream 0.5kb downstream 500 false Chr09: 48108909-48109408 Sorghum bicolor
Sobic.009G127400 1.0kb upstream 1.0kb upstream 5682 true Chr09: 48103227-48108908 Sorghum bicolor
Sobic.009G127400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48103227-48104226 Sorghum bicolor
Sobic.009G127400 1.0kb downstream 1.0kb downstream 5682 true Chr09: 48104227-48109908 Sorghum bicolor
Sobic.009G127400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48108909-48109908 Sorghum bicolor
Sobic.009G127400 2.0kb upstream 2.0kb upstream 6682 true Chr09: 48102227-48108908 Sorghum bicolor
Sobic.009G127400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48102227-48104226 Sorghum bicolor
Sobic.009G127400 2.0kb downstream 2.0kb downstream 6682 true Chr09: 48104227-48110908 Sorghum bicolor
Sobic.009G127400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48108909-48110908 Sorghum bicolor
Sobic.009G127400 5.0kb upstream 5.0kb upstream 9682 true Chr09: 48099227-48108908 Sorghum bicolor
Sobic.009G127400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48099227-48104226 Sorghum bicolor
Sobic.009G127400 5.0kb downstream 5.0kb downstream 9682 true Chr09: 48104227-48113908 Sorghum bicolor
Sobic.009G127400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48108909-48113908 Sorghum bicolor
Sobic.009G127400 10.0kb upstream 10.0kb upstream 14682 true Chr09: 48094227-48108908 Sorghum bicolor
Sobic.009G127400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48094227-48104226 Sorghum bicolor
Sobic.009G127400 10.0kb downstream 10.0kb downstream 14682 true Chr09: 48104227-48118908 Sorghum bicolor
Sobic.009G127400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48108909-48118908 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176419 5267 Panicoideae View MSA
124577792 5269 Grass View MSA
122044872 5273 Angiosperm View MSA
121348914 5274 Embryophyte View MSA
123381076 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.605       Low
cufflinks 1.022        
cufflinks 2.46       High
cufflinks 1.619        
cufflinks 2.332        
cufflinks 2.709       High
cufflinks 2.179        
cufflinks 2.035        
cufflinks 1.178        
cufflinks 1.249        
cufflinks 0.377       Low
cufflinks 0.519       Low
cufflinks 1.837        
cufflinks 0.423       Low
cufflinks 1.55        
cufflinks 2.887       High
cufflinks 2.084        
cufflinks 2.735       High
cufflinks 2.008        
cufflinks 1.512        
cufflinks 1.649        
cufflinks 0.637        
cufflinks 0.43       Low
cufflinks 0.451       Low
cufflinks 1.159        
cufflinks 0.756        
cufflinks 0.628       Low
cufflinks 0.518       Low
cufflinks 4.68       High
cufflinks 1.872        

0 Strain