PhytoMine: Gene 29848.t000086 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
29848.t000086 0.5kb upstream	0.5kb	upstream	3842	true	29848: 456237-460078	Ricinus communis
29848.t000086 0.5kb upstream	0.5kb	upstream	500	false	29848: 459579-460078	Ricinus communis
29848.t000086 0.5kb downstream	0.5kb	downstream	3842	true	29848: 455737-459578	Ricinus communis
29848.t000086 0.5kb downstream	0.5kb	downstream	500	false	29848: 455737-456236	Ricinus communis
29848.t000086 1.0kb upstream	1.0kb	upstream	4342	true	29848: 456237-460578	Ricinus communis
29848.t000086 1.0kb upstream	1.0kb	upstream	1000	false	29848: 459579-460578	Ricinus communis
29848.t000086 1.0kb downstream	1.0kb	downstream	4342	true	29848: 455237-459578	Ricinus communis
29848.t000086 1.0kb downstream	1.0kb	downstream	1000	false	29848: 455237-456236	Ricinus communis
29848.t000086 2.0kb upstream	2.0kb	upstream	5342	true	29848: 456237-461578	Ricinus communis
29848.t000086 2.0kb upstream	2.0kb	upstream	2000	false	29848: 459579-461578	Ricinus communis
29848.t000086 2.0kb downstream	2.0kb	downstream	5342	true	29848: 454237-459578	Ricinus communis
29848.t000086 2.0kb downstream	2.0kb	downstream	2000	false	29848: 454237-456236	Ricinus communis
29848.t000086 5.0kb upstream	5.0kb	upstream	8342	true	29848: 456237-464578	Ricinus communis
29848.t000086 5.0kb upstream	5.0kb	upstream	5000	false	29848: 459579-464578	Ricinus communis
29848.t000086 5.0kb downstream	5.0kb	downstream	8342	true	29848: 451237-459578	Ricinus communis
29848.t000086 5.0kb downstream	5.0kb	downstream	5000	false	29848: 451237-456236	Ricinus communis
29848.t000086 10.0kb upstream	10.0kb	upstream	13342	true	29848: 456237-469578	Ricinus communis
29848.t000086 10.0kb upstream	10.0kb	upstream	10000	false	29848: 459579-469578	Ricinus communis
29848.t000086 10.0kb downstream	10.0kb	downstream	13342	true	29848: 446237-459578	Ricinus communis
29848.t000086 10.0kb downstream	10.0kb	downstream	10000	false	29848: 446237-456236	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122455258	5262	Malpighiales	View MSA
124237544	5268	Malvidae	View MSA
124068789	5270	Rosid	View MSA
123737281	5271	Pentapetalae	View MSA
122788345	5272	Eudicot	View MSA
122045330	5273	Angiosperm	View MSA
123429046	5275	Viridiplantae	View MSA
121351195	5274	Embryophyte	View MSA

Defline:	(1 of 9) KOG1840 - Kinesin light chain	Genomic Order:	85
Name:	29848.t000086	Secondary Identifier:	PAC:16811186

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Message:	---- Current page: ---- /phytomine/report.do?id=8931587 ---- Current query: ---- <query name="" model="genomic" view="ProteinFamily.member.protein.primaryIdentifier ProteinFamily.member.protein.organism.shortName ProteinFamily.member.proteinFamily.clusterId ProteinFamily.member.proteinFamily.clusterName ProteinFamily.member.count ProteinFamily.member.proteinFamily.methodId ProteinFamily.member.proteinFamily.methodName" longDescription=""><join path="ProteinFamily.member.protein" style="OUTER"/><join path="ProteinFamily.member.protein.organism" style="OUTER"/><join path="ProteinFamily.member.proteinFamily" style="OUTER"/><constraint path="ProteinFamily.id" op="=" value="-1810056513"/></query>

Gene : 29848.t000086 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain