Gene : 29848.t000123 R. communis v0.1
Defline:  (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5) Genomic Order:  122
Name:  ? 29848.t000123 Secondary Identifier:  ? PAC:16811223
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis ASPARTATE-DEG1-PWY Ricinus communis pathologic  
Rcommunis ASPARTATESYN-PWY Ricinus communis pathologic  
Rcommunis PWY-3001 Ricinus communis pathologic  
Rcommunis PWY-7115 Ricinus communis pathologic  
Rcommunis PWY-7117 Ricinus communis pathologic  
Rcommunis THRESYN-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29848.t000123 0.5kb upstream 0.5kb upstream 3511 true 29848: 734772-738282 Ricinus communis
29848.t000123 0.5kb upstream 0.5kb upstream 500 false 29848: 734772-735271 Ricinus communis
29848.t000123 0.5kb downstream 0.5kb downstream 3511 true 29848: 735272-738782 Ricinus communis
29848.t000123 0.5kb downstream 0.5kb downstream 500 false 29848: 738283-738782 Ricinus communis
29848.t000123 1.0kb upstream 1.0kb upstream 4011 true 29848: 734272-738282 Ricinus communis
29848.t000123 1.0kb upstream 1.0kb upstream 1000 false 29848: 734272-735271 Ricinus communis
29848.t000123 1.0kb downstream 1.0kb downstream 4011 true 29848: 735272-739282 Ricinus communis
29848.t000123 1.0kb downstream 1.0kb downstream 1000 false 29848: 738283-739282 Ricinus communis
29848.t000123 2.0kb upstream 2.0kb upstream 5011 true 29848: 733272-738282 Ricinus communis
29848.t000123 2.0kb upstream 2.0kb upstream 2000 false 29848: 733272-735271 Ricinus communis
29848.t000123 2.0kb downstream 2.0kb downstream 5011 true 29848: 735272-740282 Ricinus communis
29848.t000123 2.0kb downstream 2.0kb downstream 2000 false 29848: 738283-740282 Ricinus communis
29848.t000123 5.0kb upstream 5.0kb upstream 8011 true 29848: 730272-738282 Ricinus communis
29848.t000123 5.0kb upstream 5.0kb upstream 5000 false 29848: 730272-735271 Ricinus communis
29848.t000123 5.0kb downstream 5.0kb downstream 8011 true 29848: 735272-743282 Ricinus communis
29848.t000123 5.0kb downstream 5.0kb downstream 5000 false 29848: 738283-743282 Ricinus communis
29848.t000123 10.0kb upstream 10.0kb upstream 13011 true 29848: 725272-738282 Ricinus communis
29848.t000123 10.0kb upstream 10.0kb upstream 10000 false 29848: 725272-735271 Ricinus communis
29848.t000123 10.0kb downstream 10.0kb downstream 13011 true 29848: 735272-748282 Ricinus communis
29848.t000123 10.0kb downstream 10.0kb downstream 10000 false 29848: 738283-748282 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457311 5262 Malpighiales View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain