Gene : 29827.t000106 R. communis v0.1
Defline:  (1 of 4) PTHR11778//PTHR11778:SF7 - SERYL-TRNA SYNTHETASE // SERINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  103
Name:  ? 29827.t000106 Secondary Identifier:  ? PAC:16810064
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29827.t000106 0.5kb upstream 0.5kb upstream 3035 true 29827: 580609-583643 Ricinus communis
29827.t000106 0.5kb upstream 0.5kb upstream 500 false 29827: 583144-583643 Ricinus communis
29827.t000106 0.5kb downstream 0.5kb downstream 3035 true 29827: 580109-583143 Ricinus communis
29827.t000106 0.5kb downstream 0.5kb downstream 500 false 29827: 580109-580608 Ricinus communis
29827.t000106 1.0kb upstream 1.0kb upstream 3535 true 29827: 580609-584143 Ricinus communis
29827.t000106 1.0kb upstream 1.0kb upstream 1000 false 29827: 583144-584143 Ricinus communis
29827.t000106 1.0kb downstream 1.0kb downstream 3535 true 29827: 579609-583143 Ricinus communis
29827.t000106 1.0kb downstream 1.0kb downstream 1000 false 29827: 579609-580608 Ricinus communis
29827.t000106 2.0kb upstream 2.0kb upstream 4535 true 29827: 580609-585143 Ricinus communis
29827.t000106 2.0kb upstream 2.0kb upstream 2000 false 29827: 583144-585143 Ricinus communis
29827.t000106 2.0kb downstream 2.0kb downstream 4535 true 29827: 578609-583143 Ricinus communis
29827.t000106 2.0kb downstream 2.0kb downstream 2000 false 29827: 578609-580608 Ricinus communis
29827.t000106 5.0kb upstream 5.0kb upstream 7535 true 29827: 580609-588143 Ricinus communis
29827.t000106 5.0kb upstream 5.0kb upstream 5000 false 29827: 583144-588143 Ricinus communis
29827.t000106 5.0kb downstream 5.0kb downstream 7535 true 29827: 575609-583143 Ricinus communis
29827.t000106 5.0kb downstream 5.0kb downstream 5000 false 29827: 575609-580608 Ricinus communis
29827.t000106 10.0kb upstream 10.0kb upstream 12535 true 29827: 580609-593143 Ricinus communis
29827.t000106 10.0kb upstream 10.0kb upstream 10000 false 29827: 583144-593143 Ricinus communis
29827.t000106 10.0kb downstream 10.0kb downstream 12535 true 29827: 570609-583143 Ricinus communis
29827.t000106 10.0kb downstream 10.0kb downstream 10000 false 29827: 570609-580608 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454609 5262 Malpighiales View MSA
124237440 5268 Malvidae View MSA
124063833 5270 Rosid View MSA
123738536 5271 Pentapetalae View MSA
122786779 5272 Eudicot View MSA
122041756 5273 Angiosperm View MSA
121347508 5274 Embryophyte View MSA
123423893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain