Gene : 29822.t000089 R. communis v0.1
Defline:  (1 of 3) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  89
Name:  ? 29822.t000089 Secondary Identifier:  ? PAC:16809784
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29822.t000089 0.5kb upstream 0.5kb upstream 1466 true 29822: 458505-459970 Ricinus communis
29822.t000089 0.5kb upstream 0.5kb upstream 500 false 29822: 458505-459004 Ricinus communis
29822.t000089 0.5kb downstream 0.5kb downstream 1466 true 29822: 459005-460470 Ricinus communis
29822.t000089 0.5kb downstream 0.5kb downstream 500 false 29822: 459971-460470 Ricinus communis
29822.t000089 1.0kb upstream 1.0kb upstream 1966 true 29822: 458005-459970 Ricinus communis
29822.t000089 1.0kb upstream 1.0kb upstream 1000 false 29822: 458005-459004 Ricinus communis
29822.t000089 1.0kb downstream 1.0kb downstream 1966 true 29822: 459005-460970 Ricinus communis
29822.t000089 1.0kb downstream 1.0kb downstream 1000 false 29822: 459971-460970 Ricinus communis
29822.t000089 2.0kb upstream 2.0kb upstream 2966 true 29822: 457005-459970 Ricinus communis
29822.t000089 2.0kb upstream 2.0kb upstream 2000 false 29822: 457005-459004 Ricinus communis
29822.t000089 2.0kb downstream 2.0kb downstream 2966 true 29822: 459005-461970 Ricinus communis
29822.t000089 2.0kb downstream 2.0kb downstream 2000 false 29822: 459971-461970 Ricinus communis
29822.t000089 5.0kb upstream 5.0kb upstream 5966 true 29822: 454005-459970 Ricinus communis
29822.t000089 5.0kb upstream 5.0kb upstream 5000 false 29822: 454005-459004 Ricinus communis
29822.t000089 5.0kb downstream 5.0kb downstream 5966 true 29822: 459005-464970 Ricinus communis
29822.t000089 5.0kb downstream 5.0kb downstream 5000 false 29822: 459971-464970 Ricinus communis
29822.t000089 10.0kb upstream 10.0kb upstream 10966 true 29822: 449005-459970 Ricinus communis
29822.t000089 10.0kb upstream 10.0kb upstream 10000 false 29822: 449005-459004 Ricinus communis
29822.t000089 10.0kb downstream 10.0kb downstream 10966 true 29822: 459005-469970 Ricinus communis
29822.t000089 10.0kb downstream 10.0kb downstream 10000 false 29822: 459971-469970 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122439394 5262 Malpighiales Singleton cluster - no MSA
124227745 5268 Malvidae Singleton cluster - no MSA
124075488 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain