GO Term : GO:0003911 DNA ligase (NAD+) activity GO

Namespace:  molecular_function Obsolete:  false
description  Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

65 Ontology Annotations

Class GO Term Gene Name Db
GOAnnotation GO:0003911 31200.t000001  
OntologyAnnotation GO:0003911 31200.m000015 GO
GOAnnotation GO:0003911 estExt_Genewise1Plus.C_7_t10318  
OntologyAnnotation GO:0003911 179233 GO
GOAnnotation GO:0003911 eugene.2000010156  
OntologyAnnotation GO:0003911 29450 GO
OntologyAnnotation GO:0003911 Araha.11756s0311.1.p GO
GOAnnotation GO:0003911 Araha.11756s0311  
GOAnnotation GO:0003911 Cre06.g294200  
OntologyAnnotation GO:0003911 Cre06.g294200.t1.1 GO
OntologyAnnotation GO:0003911 Sphfalx0033s0069.1.p GO
GOAnnotation GO:0003911 Sphfalx0033s0069  
OntologyAnnotation GO:0003911 Pp3c23_20740V3.1.p GO
GOAnnotation GO:0003911 Pp3c23_20740  
OntologyAnnotation GO:0003911 Pp3c23_20740V3.2.p GO
GOAnnotation GO:0003911 Pp3s32_280  
OntologyAnnotation GO:0003911 Pp3s32_280V3.1.p GO
GOAnnotation GO:0003911 Mapoly0107s0037  
OntologyAnnotation GO:0003911 Mapoly0107s0037.1.p GO
OntologyAnnotation GO:0003911 Dusal.0194s00007.1.p GO
GOAnnotation GO:0003911 Dusal.0194s00007  
GOAnnotation GO:0003911 Pum0027s0115  
OntologyAnnotation GO:0003911 Pum0027s0115.1.p GO
GOAnnotation GO:0003911 Cz11g21030  
OntologyAnnotation GO:0003911 Cz11g21030.t1 GO
GOAnnotation GO:0003911 Bobra.0102s0036  
OntologyAnnotation GO:0003911 Bobra.0102s0036.1.p GO
GOAnnotation GO:0003911 Sphmag10G021800  
OntologyAnnotation GO:0003911 Sphmag10G021800.3.p GO
OntologyAnnotation GO:0003911 Sphmag10G021800.4.p GO

23 Parents

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016874 ligase activity Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0006259 DNA metabolic process Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0044260 cellular macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
GO:0003911 DNA ligase (NAD+) activity Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0003674 molecular_function Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
GO:0090304 nucleic acid metabolic process Any cellular metabolic process involving nucleic acids.
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0006266 DNA ligation The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.
GO:0003909 DNA ligase activity Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+.
GO:0016886 ligase activity, forming phosphoric ester bonds Catalysis of the joining of two molecules, or two groups within a single molecule, via a phosphoric ester bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.

22 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0003909 GO:0003911
is_a GO:0003824 GO:0003911
part of GO:0009987 GO:0003911
part of GO:1901360 GO:0003911
is_a GO:0003674 GO:0003911
part of GO:0090304 GO:0003911
part of GO:0034641 GO:0003911
part of GO:0006807 GO:0003911
part of GO:0044260 GO:0003911
part of GO:0043170 GO:0003911
part of GO:0071704 GO:0003911
part of GO:0006725 GO:0003911
is_a GO:0016874 GO:0003911
is_a GO:0016886 GO:0003911
part of GO:0006139 GO:0003911
part of GO:0008150 GO:0003911
part of GO:0006259 GO:0003911
part of GO:0046483 GO:0003911
part of GO:0008152 GO:0003911
part of GO:0044238 GO:0003911
part of GO:0044237 GO:0003911
part of GO:0006266 GO:0003911

22 Synonyms

Name Type
DNA joinase activity synonym
deoxyribonucleic-joining enzyme synonym
DNA-joining enzyme synonym
DNA repair enzyme activity synonym
polynucleotide ligase synonym
deoxyribonucleic acid joinase synonym
deoxyribonucleate ligase synonym
deoxyribonucleic acid ligase synonym
deoxyribonucleic joinase synonym
deoxyribonucleic repair enzyme synonym
deoxyribonucleic ligase synonym
polynucleotide ligase (NAD(+)) activity synonym
polydeoxyribonucleotide synthase (NAD+) activity synonym
polynucleotide ligase (NAD+) activity synonym
polynucleotide ligase (NAD) synonym
polynucleotide synthetase (nicotinamide adenine dinucleotide) synonym
polynucleotide ligase (nicotinamide adenine dinucleotide) synonym
polynucleotide synthetase activity synonym
poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming, NMN-forming) synonym
DNA ligase (NAD) synonym
polydeoxyribonucleotide synthase (NAD) synonym
Polydeoxyribonucleotide synthase (NAD(+)) activity synonym