Gene : Thecc1EG042000 T. cacao v1.1
Defline:  (1 of 2) PTHR32467//PTHR32467:SF29 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Genomic Order:  3300
Name:  ? Thecc1EG042000 Secondary Identifier:  ? PAC:27429578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042000 0.5kb upstream 0.5kb upstream 4805 true scaffold_9: 40524104-40528908 Theobroma cacao
Thecc1EG042000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40524104-40524603 Theobroma cacao
Thecc1EG042000 0.5kb downstream 0.5kb downstream 4805 true scaffold_9: 40524604-40529408 Theobroma cacao
Thecc1EG042000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40528909-40529408 Theobroma cacao
Thecc1EG042000 1.0kb upstream 1.0kb upstream 5305 true scaffold_9: 40523604-40528908 Theobroma cacao
Thecc1EG042000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40523604-40524603 Theobroma cacao
Thecc1EG042000 1.0kb downstream 1.0kb downstream 5305 true scaffold_9: 40524604-40529908 Theobroma cacao
Thecc1EG042000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40528909-40529908 Theobroma cacao
Thecc1EG042000 2.0kb upstream 2.0kb upstream 6305 true scaffold_9: 40522604-40528908 Theobroma cacao
Thecc1EG042000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40522604-40524603 Theobroma cacao
Thecc1EG042000 2.0kb downstream 2.0kb downstream 6305 true scaffold_9: 40524604-40530908 Theobroma cacao
Thecc1EG042000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40528909-40530908 Theobroma cacao
Thecc1EG042000 5.0kb upstream 5.0kb upstream 9305 true scaffold_9: 40519604-40528908 Theobroma cacao
Thecc1EG042000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40519604-40524603 Theobroma cacao
Thecc1EG042000 5.0kb downstream 5.0kb downstream 9305 true scaffold_9: 40524604-40533908 Theobroma cacao
Thecc1EG042000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40528909-40533908 Theobroma cacao
Thecc1EG042000 10.0kb upstream 10.0kb upstream 14305 true scaffold_9: 40514604-40528908 Theobroma cacao
Thecc1EG042000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40514604-40524603 Theobroma cacao
Thecc1EG042000 10.0kb downstream 10.0kb downstream 14305 true scaffold_9: 40524604-40538908 Theobroma cacao
Thecc1EG042000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40528909-40538908 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830463 5264 Brassicales-Malvales View MSA
124341494 5266 SBM View MSA
124248425 5268 Malvidae View MSA
124071851 5270 Rosid View MSA
123742142 5271 Pentapetalae View MSA
122795451 5272 Eudicot View MSA
122048661 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121311060 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain