Gene : Thecc1EG040900 T. cacao v1.1
Defline:  (1 of 1) 3.5.2.2 - Dihydropyrimidinase / Hydantoinase Genomic Order:  2440
Name:  ? Thecc1EG040900 Secondary Identifier:  ? PAC:27429121
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3982 Theobroma cacao pathologic  
Tcacao PWY-6430 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040900 0.5kb upstream 0.5kb upstream 9217 true scaffold_9: 34206603-34215819 Theobroma cacao
Thecc1EG040900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34215320-34215819 Theobroma cacao
Thecc1EG040900 0.5kb downstream 0.5kb downstream 9217 true scaffold_9: 34206103-34215319 Theobroma cacao
Thecc1EG040900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34206103-34206602 Theobroma cacao
Thecc1EG040900 1.0kb upstream 1.0kb upstream 9717 true scaffold_9: 34206603-34216319 Theobroma cacao
Thecc1EG040900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34215320-34216319 Theobroma cacao
Thecc1EG040900 1.0kb downstream 1.0kb downstream 9717 true scaffold_9: 34205603-34215319 Theobroma cacao
Thecc1EG040900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34205603-34206602 Theobroma cacao
Thecc1EG040900 2.0kb upstream 2.0kb upstream 10717 true scaffold_9: 34206603-34217319 Theobroma cacao
Thecc1EG040900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34215320-34217319 Theobroma cacao
Thecc1EG040900 2.0kb downstream 2.0kb downstream 10717 true scaffold_9: 34204603-34215319 Theobroma cacao
Thecc1EG040900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34204603-34206602 Theobroma cacao
Thecc1EG040900 5.0kb upstream 5.0kb upstream 13717 true scaffold_9: 34206603-34220319 Theobroma cacao
Thecc1EG040900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34215320-34220319 Theobroma cacao
Thecc1EG040900 5.0kb downstream 5.0kb downstream 13717 true scaffold_9: 34201603-34215319 Theobroma cacao
Thecc1EG040900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34201603-34206602 Theobroma cacao
Thecc1EG040900 10.0kb upstream 10.0kb upstream 18717 true scaffold_9: 34206603-34225319 Theobroma cacao
Thecc1EG040900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34215320-34225319 Theobroma cacao
Thecc1EG040900 10.0kb downstream 10.0kb downstream 18717 true scaffold_9: 34196603-34215319 Theobroma cacao
Thecc1EG040900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34196603-34206602 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828223 5264 Brassicales-Malvales View MSA
124341067 5266 SBM View MSA
124243285 5268 Malvidae View MSA
124064802 5270 Rosid View MSA
123752945 5271 Pentapetalae View MSA
122786753 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain