Gene : Thecc1EG040793 T. cacao v1.1

Defline:  (1 of 1) 1.5.1.43 - Carboxynorspermidine synthase / Carboxyspermidine dehydrogenase Genomic Order:  2370
Name:  ? Thecc1EG040793 Secondary Identifier:  ? PAC:27431171

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040793 0.5kb upstream 0.5kb upstream 7533 true scaffold_9: 33435328-33442860 Theobroma cacao
Thecc1EG040793 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33442361-33442860 Theobroma cacao
Thecc1EG040793 0.5kb downstream 0.5kb downstream 7533 true scaffold_9: 33434828-33442360 Theobroma cacao
Thecc1EG040793 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33434828-33435327 Theobroma cacao
Thecc1EG040793 1.0kb upstream 1.0kb upstream 8033 true scaffold_9: 33435328-33443360 Theobroma cacao
Thecc1EG040793 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33442361-33443360 Theobroma cacao
Thecc1EG040793 1.0kb downstream 1.0kb downstream 8033 true scaffold_9: 33434328-33442360 Theobroma cacao
Thecc1EG040793 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33434328-33435327 Theobroma cacao
Thecc1EG040793 2.0kb upstream 2.0kb upstream 9033 true scaffold_9: 33435328-33444360 Theobroma cacao
Thecc1EG040793 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33442361-33444360 Theobroma cacao
Thecc1EG040793 2.0kb downstream 2.0kb downstream 9033 true scaffold_9: 33433328-33442360 Theobroma cacao
Thecc1EG040793 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33433328-33435327 Theobroma cacao
Thecc1EG040793 5.0kb upstream 5.0kb upstream 12033 true scaffold_9: 33435328-33447360 Theobroma cacao
Thecc1EG040793 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33442361-33447360 Theobroma cacao
Thecc1EG040793 5.0kb downstream 5.0kb downstream 12033 true scaffold_9: 33430328-33442360 Theobroma cacao
Thecc1EG040793 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33430328-33435327 Theobroma cacao
Thecc1EG040793 10.0kb upstream 10.0kb upstream 17033 true scaffold_9: 33435328-33452360 Theobroma cacao
Thecc1EG040793 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33442361-33452360 Theobroma cacao
Thecc1EG040793 10.0kb downstream 10.0kb downstream 17033 true scaffold_9: 33425328-33442360 Theobroma cacao
Thecc1EG040793 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33425328-33435327 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828321 5264 Brassicales-Malvales View MSA
124345882 5266 SBM View MSA
124239236 5268 Malvidae View MSA
124065945 5270 Rosid View MSA
123752948 5271 Pentapetalae View MSA
122790267 5272 Eudicot View MSA
122051589 5273 Angiosperm View MSA
121345153 5274 Embryophyte View MSA
123426869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain