Gene : Thecc1EG040336 T. cacao v1.1
Defline:  (1 of 1) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Genomic Order:  2137
Name:  ? Thecc1EG040336 Secondary Identifier:  ? PAC:27426713
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6773 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040336 0.5kb upstream 0.5kb upstream 39815 true scaffold_9: 29036896-29076710 Theobroma cacao
Thecc1EG040336 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 29076211-29076710 Theobroma cacao
Thecc1EG040336 0.5kb downstream 0.5kb downstream 39815 true scaffold_9: 29036396-29076210 Theobroma cacao
Thecc1EG040336 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 29036396-29036895 Theobroma cacao
Thecc1EG040336 1.0kb upstream 1.0kb upstream 40315 true scaffold_9: 29036896-29077210 Theobroma cacao
Thecc1EG040336 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 29076211-29077210 Theobroma cacao
Thecc1EG040336 1.0kb downstream 1.0kb downstream 40315 true scaffold_9: 29035896-29076210 Theobroma cacao
Thecc1EG040336 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 29035896-29036895 Theobroma cacao
Thecc1EG040336 2.0kb upstream 2.0kb upstream 41315 true scaffold_9: 29036896-29078210 Theobroma cacao
Thecc1EG040336 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 29076211-29078210 Theobroma cacao
Thecc1EG040336 2.0kb downstream 2.0kb downstream 41315 true scaffold_9: 29034896-29076210 Theobroma cacao
Thecc1EG040336 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 29034896-29036895 Theobroma cacao
Thecc1EG040336 5.0kb upstream 5.0kb upstream 44315 true scaffold_9: 29036896-29081210 Theobroma cacao
Thecc1EG040336 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 29076211-29081210 Theobroma cacao
Thecc1EG040336 5.0kb downstream 5.0kb downstream 44315 true scaffold_9: 29031896-29076210 Theobroma cacao
Thecc1EG040336 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 29031896-29036895 Theobroma cacao
Thecc1EG040336 10.0kb upstream 10.0kb upstream 49315 true scaffold_9: 29036896-29086210 Theobroma cacao
Thecc1EG040336 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 29076211-29086210 Theobroma cacao
Thecc1EG040336 10.0kb downstream 10.0kb downstream 49315 true scaffold_9: 29026896-29076210 Theobroma cacao
Thecc1EG040336 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 29026896-29036895 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830920 5264 Brassicales-Malvales View MSA
124350687 5266 SBM View MSA
124241987 5268 Malvidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain