Gene : Thecc1EG038455 T. cacao v1.1

Defline:  Uncharacterized protein (81%P) Genomic Order:  1503
Name:  ? Thecc1EG038455 Secondary Identifier:  ? PAC:27430011

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG038455 0.5kb upstream 0.5kb upstream 2210 true scaffold_9: 9403443-9405652 Theobroma cacao
Thecc1EG038455 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 9405153-9405652 Theobroma cacao
Thecc1EG038455 0.5kb downstream 0.5kb downstream 2210 true scaffold_9: 9402943-9405152 Theobroma cacao
Thecc1EG038455 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 9402943-9403442 Theobroma cacao
Thecc1EG038455 1.0kb upstream 1.0kb upstream 2710 true scaffold_9: 9403443-9406152 Theobroma cacao
Thecc1EG038455 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 9405153-9406152 Theobroma cacao
Thecc1EG038455 1.0kb downstream 1.0kb downstream 2710 true scaffold_9: 9402443-9405152 Theobroma cacao
Thecc1EG038455 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 9402443-9403442 Theobroma cacao
Thecc1EG038455 2.0kb upstream 2.0kb upstream 3710 true scaffold_9: 9403443-9407152 Theobroma cacao
Thecc1EG038455 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 9405153-9407152 Theobroma cacao
Thecc1EG038455 2.0kb downstream 2.0kb downstream 3710 true scaffold_9: 9401443-9405152 Theobroma cacao
Thecc1EG038455 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 9401443-9403442 Theobroma cacao
Thecc1EG038455 5.0kb upstream 5.0kb upstream 6710 true scaffold_9: 9403443-9410152 Theobroma cacao
Thecc1EG038455 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 9405153-9410152 Theobroma cacao
Thecc1EG038455 5.0kb downstream 5.0kb downstream 6710 true scaffold_9: 9398443-9405152 Theobroma cacao
Thecc1EG038455 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 9398443-9403442 Theobroma cacao
Thecc1EG038455 10.0kb upstream 10.0kb upstream 11710 true scaffold_9: 9403443-9415152 Theobroma cacao
Thecc1EG038455 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 9405153-9415152 Theobroma cacao
Thecc1EG038455 10.0kb downstream 10.0kb downstream 11710 true scaffold_9: 9393443-9405152 Theobroma cacao
Thecc1EG038455 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 9393443-9403442 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823779 5264 Brassicales-Malvales View MSA
124319835 5266 SBM View MSA
124168344 5268 Malvidae View MSA
123891752 5270 Rosid View MSA
123474015 5271 Pentapetalae View MSA
122797575 5272 Eudicot View MSA
122050581 5273 Angiosperm View MSA
121312004 5274 Embryophyte View MSA
123349221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain