Gene : Thecc1EG037764 T. cacao v1.1
Defline:  (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  945
Name:  ? Thecc1EG037764 Secondary Identifier:  ? PAC:27428594
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao TRNA-CHARGING-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037764 0.5kb upstream 0.5kb upstream 7548 true scaffold_9: 5173551-5181098 Theobroma cacao
Thecc1EG037764 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5180599-5181098 Theobroma cacao
Thecc1EG037764 0.5kb downstream 0.5kb downstream 7548 true scaffold_9: 5173051-5180598 Theobroma cacao
Thecc1EG037764 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5173051-5173550 Theobroma cacao
Thecc1EG037764 1.0kb upstream 1.0kb upstream 8048 true scaffold_9: 5173551-5181598 Theobroma cacao
Thecc1EG037764 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5180599-5181598 Theobroma cacao
Thecc1EG037764 1.0kb downstream 1.0kb downstream 8048 true scaffold_9: 5172551-5180598 Theobroma cacao
Thecc1EG037764 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5172551-5173550 Theobroma cacao
Thecc1EG037764 2.0kb upstream 2.0kb upstream 9048 true scaffold_9: 5173551-5182598 Theobroma cacao
Thecc1EG037764 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5180599-5182598 Theobroma cacao
Thecc1EG037764 2.0kb downstream 2.0kb downstream 9048 true scaffold_9: 5171551-5180598 Theobroma cacao
Thecc1EG037764 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5171551-5173550 Theobroma cacao
Thecc1EG037764 5.0kb upstream 5.0kb upstream 12048 true scaffold_9: 5173551-5185598 Theobroma cacao
Thecc1EG037764 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5180599-5185598 Theobroma cacao
Thecc1EG037764 5.0kb downstream 5.0kb downstream 12048 true scaffold_9: 5168551-5180598 Theobroma cacao
Thecc1EG037764 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5168551-5173550 Theobroma cacao
Thecc1EG037764 10.0kb upstream 10.0kb upstream 17048 true scaffold_9: 5173551-5190598 Theobroma cacao
Thecc1EG037764 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5180599-5190598 Theobroma cacao
Thecc1EG037764 10.0kb downstream 10.0kb downstream 17048 true scaffold_9: 5163551-5180598 Theobroma cacao
Thecc1EG037764 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5163551-5173550 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837210 5264 Brassicales-Malvales View MSA
124337700 5266 SBM View MSA
124238574 5268 Malvidae View MSA
124068746 5270 Rosid View MSA
123739648 5271 Pentapetalae View MSA
122789806 5272 Eudicot View MSA
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain