Gene : Thecc1EG037769 T. cacao v1.1
Defline:  (1 of 1) PTHR31321//PTHR31321:SF17 - FAMILY NOT NAMED // PECTINESTERASE 53-RELATED Genomic Order:  950
Name:  ? Thecc1EG037769 Secondary Identifier:  ? PAC:27426853
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037769 0.5kb upstream 0.5kb upstream 7919 true scaffold_9: 5203842-5211760 Theobroma cacao
Thecc1EG037769 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5203842-5204341 Theobroma cacao
Thecc1EG037769 0.5kb downstream 0.5kb downstream 7919 true scaffold_9: 5204342-5212260 Theobroma cacao
Thecc1EG037769 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5211761-5212260 Theobroma cacao
Thecc1EG037769 1.0kb upstream 1.0kb upstream 8419 true scaffold_9: 5203342-5211760 Theobroma cacao
Thecc1EG037769 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5203342-5204341 Theobroma cacao
Thecc1EG037769 1.0kb downstream 1.0kb downstream 8419 true scaffold_9: 5204342-5212760 Theobroma cacao
Thecc1EG037769 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5211761-5212760 Theobroma cacao
Thecc1EG037769 2.0kb upstream 2.0kb upstream 9419 true scaffold_9: 5202342-5211760 Theobroma cacao
Thecc1EG037769 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5202342-5204341 Theobroma cacao
Thecc1EG037769 2.0kb downstream 2.0kb downstream 9419 true scaffold_9: 5204342-5213760 Theobroma cacao
Thecc1EG037769 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5211761-5213760 Theobroma cacao
Thecc1EG037769 5.0kb upstream 5.0kb upstream 12419 true scaffold_9: 5199342-5211760 Theobroma cacao
Thecc1EG037769 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5199342-5204341 Theobroma cacao
Thecc1EG037769 5.0kb downstream 5.0kb downstream 12419 true scaffold_9: 5204342-5216760 Theobroma cacao
Thecc1EG037769 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5211761-5216760 Theobroma cacao
Thecc1EG037769 10.0kb upstream 10.0kb upstream 17419 true scaffold_9: 5194342-5211760 Theobroma cacao
Thecc1EG037769 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5194342-5204341 Theobroma cacao
Thecc1EG037769 10.0kb downstream 10.0kb downstream 17419 true scaffold_9: 5204342-5221760 Theobroma cacao
Thecc1EG037769 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5211761-5221760 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835653 5264 Brassicales-Malvales View MSA
124350077 5266 SBM View MSA
124237911 5268 Malvidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain