Gene : Thecc1EG037082 T. cacao v1.1
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Genomic Order:  313
Name:  ? Thecc1EG037082 Secondary Identifier:  ? PAC:27430975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037082 0.5kb upstream 0.5kb upstream 2255 true scaffold_9: 1658745-1660999 Theobroma cacao
Thecc1EG037082 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1660500-1660999 Theobroma cacao
Thecc1EG037082 0.5kb downstream 0.5kb downstream 2255 true scaffold_9: 1658245-1660499 Theobroma cacao
Thecc1EG037082 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1658245-1658744 Theobroma cacao
Thecc1EG037082 1.0kb upstream 1.0kb upstream 2755 true scaffold_9: 1658745-1661499 Theobroma cacao
Thecc1EG037082 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1660500-1661499 Theobroma cacao
Thecc1EG037082 1.0kb downstream 1.0kb downstream 2755 true scaffold_9: 1657745-1660499 Theobroma cacao
Thecc1EG037082 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1657745-1658744 Theobroma cacao
Thecc1EG037082 2.0kb upstream 2.0kb upstream 3755 true scaffold_9: 1658745-1662499 Theobroma cacao
Thecc1EG037082 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1660500-1662499 Theobroma cacao
Thecc1EG037082 2.0kb downstream 2.0kb downstream 3755 true scaffold_9: 1656745-1660499 Theobroma cacao
Thecc1EG037082 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1656745-1658744 Theobroma cacao
Thecc1EG037082 5.0kb upstream 5.0kb upstream 6755 true scaffold_9: 1658745-1665499 Theobroma cacao
Thecc1EG037082 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1660500-1665499 Theobroma cacao
Thecc1EG037082 5.0kb downstream 5.0kb downstream 6755 true scaffold_9: 1653745-1660499 Theobroma cacao
Thecc1EG037082 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1653745-1658744 Theobroma cacao
Thecc1EG037082 10.0kb upstream 10.0kb upstream 11755 true scaffold_9: 1658745-1670499 Theobroma cacao
Thecc1EG037082 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1660500-1670499 Theobroma cacao
Thecc1EG037082 10.0kb downstream 10.0kb downstream 11755 true scaffold_9: 1648745-1660499 Theobroma cacao
Thecc1EG037082 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1648745-1658744 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829755 5264 Brassicales-Malvales View MSA
124342417 5266 SBM View MSA
124243946 5268 Malvidae View MSA
124066786 5270 Rosid View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain