Gene : Thecc1EG036956 T. cacao v1.1
Defline:  (1 of 2) PTHR12192:SF1 - CHAC-LIKE FAMILY PROTEIN Genomic Order:  195
Name:  ? Thecc1EG036956 Secondary Identifier:  ? PAC:27428997
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036956 0.5kb upstream 0.5kb upstream 2526 true scaffold_9: 1089050-1091575 Theobroma cacao
Thecc1EG036956 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1089050-1089549 Theobroma cacao
Thecc1EG036956 0.5kb downstream 0.5kb downstream 2526 true scaffold_9: 1089550-1092075 Theobroma cacao
Thecc1EG036956 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1091576-1092075 Theobroma cacao
Thecc1EG036956 1.0kb upstream 1.0kb upstream 3026 true scaffold_9: 1088550-1091575 Theobroma cacao
Thecc1EG036956 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1088550-1089549 Theobroma cacao
Thecc1EG036956 1.0kb downstream 1.0kb downstream 3026 true scaffold_9: 1089550-1092575 Theobroma cacao
Thecc1EG036956 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1091576-1092575 Theobroma cacao
Thecc1EG036956 2.0kb upstream 2.0kb upstream 4026 true scaffold_9: 1087550-1091575 Theobroma cacao
Thecc1EG036956 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1087550-1089549 Theobroma cacao
Thecc1EG036956 2.0kb downstream 2.0kb downstream 4026 true scaffold_9: 1089550-1093575 Theobroma cacao
Thecc1EG036956 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1091576-1093575 Theobroma cacao
Thecc1EG036956 5.0kb upstream 5.0kb upstream 7026 true scaffold_9: 1084550-1091575 Theobroma cacao
Thecc1EG036956 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1084550-1089549 Theobroma cacao
Thecc1EG036956 5.0kb downstream 5.0kb downstream 7026 true scaffold_9: 1089550-1096575 Theobroma cacao
Thecc1EG036956 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1091576-1096575 Theobroma cacao
Thecc1EG036956 10.0kb upstream 10.0kb upstream 12026 true scaffold_9: 1079550-1091575 Theobroma cacao
Thecc1EG036956 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1079550-1089549 Theobroma cacao
Thecc1EG036956 10.0kb downstream 10.0kb downstream 12026 true scaffold_9: 1089550-1101575 Theobroma cacao
Thecc1EG036956 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1091576-1101575 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830002 5264 Brassicales-Malvales View MSA
124340312 5266 SBM View MSA
124241642 5268 Malvidae View MSA
124060758 5270 Rosid View MSA
123751581 5271 Pentapetalae View MSA
122789241 5272 Eudicot View MSA
122047820 5273 Angiosperm View MSA
121346610 5274 Embryophyte View MSA
123426702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain