Gene : Thecc1EG034751 T. cacao v1.1

Defline:  (1 of 2) PTHR11706//PTHR11706:SF46 - MANGANESE TRANSPORTER // METAL TRANSPORTER NRAMP2-RELATED Genomic Order:  900
Name:  ? Thecc1EG034751 Secondary Identifier:  ? PAC:27458325

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034751 0.5kb upstream 0.5kb upstream 5161 true scaffold_8: 4653378-4658538 Theobroma cacao
Thecc1EG034751 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 4658039-4658538 Theobroma cacao
Thecc1EG034751 0.5kb downstream 0.5kb downstream 5161 true scaffold_8: 4652878-4658038 Theobroma cacao
Thecc1EG034751 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 4652878-4653377 Theobroma cacao
Thecc1EG034751 1.0kb upstream 1.0kb upstream 5661 true scaffold_8: 4653378-4659038 Theobroma cacao
Thecc1EG034751 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 4658039-4659038 Theobroma cacao
Thecc1EG034751 1.0kb downstream 1.0kb downstream 5661 true scaffold_8: 4652378-4658038 Theobroma cacao
Thecc1EG034751 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 4652378-4653377 Theobroma cacao
Thecc1EG034751 2.0kb upstream 2.0kb upstream 6661 true scaffold_8: 4653378-4660038 Theobroma cacao
Thecc1EG034751 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 4658039-4660038 Theobroma cacao
Thecc1EG034751 2.0kb downstream 2.0kb downstream 6661 true scaffold_8: 4651378-4658038 Theobroma cacao
Thecc1EG034751 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 4651378-4653377 Theobroma cacao
Thecc1EG034751 5.0kb upstream 5.0kb upstream 9661 true scaffold_8: 4653378-4663038 Theobroma cacao
Thecc1EG034751 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 4658039-4663038 Theobroma cacao
Thecc1EG034751 5.0kb downstream 5.0kb downstream 9661 true scaffold_8: 4648378-4658038 Theobroma cacao
Thecc1EG034751 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 4648378-4653377 Theobroma cacao
Thecc1EG034751 10.0kb upstream 10.0kb upstream 14661 true scaffold_8: 4653378-4668038 Theobroma cacao
Thecc1EG034751 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 4658039-4668038 Theobroma cacao
Thecc1EG034751 10.0kb downstream 10.0kb downstream 14661 true scaffold_8: 4643378-4658038 Theobroma cacao
Thecc1EG034751 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 4643378-4653377 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832200 5264 Brassicales-Malvales View MSA
124343623 5266 SBM View MSA
124240405 5268 Malvidae View MSA
124067526 5270 Rosid View MSA
123745753 5271 Pentapetalae View MSA
122790542 5272 Eudicot View MSA
122045270 5273 Angiosperm View MSA
121347104 5274 Embryophyte View MSA
123426907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain