Gene : Thecc1EG034287 T. cacao v1.1

Defline:  (1 of 2) K02147 - V-type H+-transporting ATPase subunit B (ATPeV1B, ATP6B) Genomic Order:  486
Name:  ? Thecc1EG034287 Secondary Identifier:  ? PAC:27457911

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034287 0.5kb upstream 0.5kb upstream 5627 true scaffold_8: 2298760-2304386 Theobroma cacao
Thecc1EG034287 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2298760-2299259 Theobroma cacao
Thecc1EG034287 0.5kb downstream 0.5kb downstream 5627 true scaffold_8: 2299260-2304886 Theobroma cacao
Thecc1EG034287 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2304387-2304886 Theobroma cacao
Thecc1EG034287 1.0kb upstream 1.0kb upstream 6127 true scaffold_8: 2298260-2304386 Theobroma cacao
Thecc1EG034287 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2298260-2299259 Theobroma cacao
Thecc1EG034287 1.0kb downstream 1.0kb downstream 6127 true scaffold_8: 2299260-2305386 Theobroma cacao
Thecc1EG034287 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2304387-2305386 Theobroma cacao
Thecc1EG034287 2.0kb upstream 2.0kb upstream 7127 true scaffold_8: 2297260-2304386 Theobroma cacao
Thecc1EG034287 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2297260-2299259 Theobroma cacao
Thecc1EG034287 2.0kb downstream 2.0kb downstream 7127 true scaffold_8: 2299260-2306386 Theobroma cacao
Thecc1EG034287 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2304387-2306386 Theobroma cacao
Thecc1EG034287 5.0kb upstream 5.0kb upstream 10127 true scaffold_8: 2294260-2304386 Theobroma cacao
Thecc1EG034287 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2294260-2299259 Theobroma cacao
Thecc1EG034287 5.0kb downstream 5.0kb downstream 10127 true scaffold_8: 2299260-2309386 Theobroma cacao
Thecc1EG034287 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2304387-2309386 Theobroma cacao
Thecc1EG034287 10.0kb upstream 10.0kb upstream 15127 true scaffold_8: 2289260-2304386 Theobroma cacao
Thecc1EG034287 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2289260-2299259 Theobroma cacao
Thecc1EG034287 10.0kb downstream 10.0kb downstream 15127 true scaffold_8: 2299260-2314386 Theobroma cacao
Thecc1EG034287 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2304387-2314386 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835921 5264 Brassicales-Malvales View MSA
124342304 5266 SBM View MSA
124248961 5268 Malvidae View MSA
124071392 5270 Rosid View MSA
123743480 5271 Pentapetalae View MSA
122794276 5272 Eudicot View MSA
122046157 5273 Angiosperm View MSA
121350179 5274 Embryophyte View MSA
123423759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain