Gene : Thecc1EG034294 T. cacao v1.1
Defline:  (1 of 2) K18752 - transportin-1 (TNPO1) Genomic Order:  493
Name:  ? Thecc1EG034294 Secondary Identifier:  ? PAC:27458930
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034294 0.5kb upstream 0.5kb upstream 12487 true scaffold_8: 2329072-2341558 Theobroma cacao
Thecc1EG034294 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2329072-2329571 Theobroma cacao
Thecc1EG034294 0.5kb downstream 0.5kb downstream 12487 true scaffold_8: 2329572-2342058 Theobroma cacao
Thecc1EG034294 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2341559-2342058 Theobroma cacao
Thecc1EG034294 1.0kb upstream 1.0kb upstream 12987 true scaffold_8: 2328572-2341558 Theobroma cacao
Thecc1EG034294 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2328572-2329571 Theobroma cacao
Thecc1EG034294 1.0kb downstream 1.0kb downstream 12987 true scaffold_8: 2329572-2342558 Theobroma cacao
Thecc1EG034294 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2341559-2342558 Theobroma cacao
Thecc1EG034294 2.0kb upstream 2.0kb upstream 13987 true scaffold_8: 2327572-2341558 Theobroma cacao
Thecc1EG034294 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2327572-2329571 Theobroma cacao
Thecc1EG034294 2.0kb downstream 2.0kb downstream 13987 true scaffold_8: 2329572-2343558 Theobroma cacao
Thecc1EG034294 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2341559-2343558 Theobroma cacao
Thecc1EG034294 5.0kb upstream 5.0kb upstream 16987 true scaffold_8: 2324572-2341558 Theobroma cacao
Thecc1EG034294 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2324572-2329571 Theobroma cacao
Thecc1EG034294 5.0kb downstream 5.0kb downstream 16987 true scaffold_8: 2329572-2346558 Theobroma cacao
Thecc1EG034294 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2341559-2346558 Theobroma cacao
Thecc1EG034294 10.0kb upstream 10.0kb upstream 21987 true scaffold_8: 2319572-2341558 Theobroma cacao
Thecc1EG034294 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2319572-2329571 Theobroma cacao
Thecc1EG034294 10.0kb downstream 10.0kb downstream 21987 true scaffold_8: 2329572-2351558 Theobroma cacao
Thecc1EG034294 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2341559-2351558 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
123822398 5264 Brassicales-Malvales Singleton cluster - no MSA
124318535 5266 SBM Singleton cluster - no MSA
124255321 5268 Malvidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain