Gene : Thecc1EG034037 T. cacao v1.1
Defline:  (1 of 1) 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent) Genomic Order:  254
Name:  ? Thecc1EG034037 Secondary Identifier:  ? PAC:27459095
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7283 Theobroma cacao pathologic  
Tcacao PWY-7286 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034037 0.5kb upstream 0.5kb upstream 4723 true scaffold_8: 1181240-1185962 Theobroma cacao
Thecc1EG034037 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 1185463-1185962 Theobroma cacao
Thecc1EG034037 0.5kb downstream 0.5kb downstream 4723 true scaffold_8: 1180740-1185462 Theobroma cacao
Thecc1EG034037 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 1180740-1181239 Theobroma cacao
Thecc1EG034037 1.0kb upstream 1.0kb upstream 5223 true scaffold_8: 1181240-1186462 Theobroma cacao
Thecc1EG034037 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 1185463-1186462 Theobroma cacao
Thecc1EG034037 1.0kb downstream 1.0kb downstream 5223 true scaffold_8: 1180240-1185462 Theobroma cacao
Thecc1EG034037 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 1180240-1181239 Theobroma cacao
Thecc1EG034037 2.0kb upstream 2.0kb upstream 6223 true scaffold_8: 1181240-1187462 Theobroma cacao
Thecc1EG034037 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 1185463-1187462 Theobroma cacao
Thecc1EG034037 2.0kb downstream 2.0kb downstream 6223 true scaffold_8: 1179240-1185462 Theobroma cacao
Thecc1EG034037 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 1179240-1181239 Theobroma cacao
Thecc1EG034037 5.0kb upstream 5.0kb upstream 9223 true scaffold_8: 1181240-1190462 Theobroma cacao
Thecc1EG034037 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 1185463-1190462 Theobroma cacao
Thecc1EG034037 5.0kb downstream 5.0kb downstream 9223 true scaffold_8: 1176240-1185462 Theobroma cacao
Thecc1EG034037 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 1176240-1181239 Theobroma cacao
Thecc1EG034037 10.0kb upstream 10.0kb upstream 14223 true scaffold_8: 1181240-1195462 Theobroma cacao
Thecc1EG034037 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 1185463-1195462 Theobroma cacao
Thecc1EG034037 10.0kb downstream 10.0kb downstream 14223 true scaffold_8: 1171240-1185462 Theobroma cacao
Thecc1EG034037 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 1171240-1181239 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833154 5264 Brassicales-Malvales View MSA
124321850 5266 SBM View MSA
124238866 5268 Malvidae View MSA
124066896 5270 Rosid View MSA
123737792 5271 Pentapetalae View MSA
122788596 5272 Eudicot View MSA
122045303 5273 Angiosperm View MSA
121343824 5274 Embryophyte View MSA
123426537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain