Gene : Thecc1EG031715 T. cacao v1.1
Defline:  (1 of 5) K00026 - malate dehydrogenase (MDH2) Genomic Order:  980
Name:  ? Thecc1EG031715 Secondary Identifier:  ? PAC:27444185
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLUCONEO-PWY Theobroma cacao pathologic  
Tcacao GLYOXYLATE-BYPASS Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5690 Theobroma cacao pathologic  
Tcacao PWY66-399 Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG031715 0.5kb upstream 0.5kb upstream 4685 true scaffold_7: 6468402-6473086 Theobroma cacao
Thecc1EG031715 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6472587-6473086 Theobroma cacao
Thecc1EG031715 0.5kb downstream 0.5kb downstream 4685 true scaffold_7: 6467902-6472586 Theobroma cacao
Thecc1EG031715 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6467902-6468401 Theobroma cacao
Thecc1EG031715 1.0kb upstream 1.0kb upstream 5185 true scaffold_7: 6468402-6473586 Theobroma cacao
Thecc1EG031715 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6472587-6473586 Theobroma cacao
Thecc1EG031715 1.0kb downstream 1.0kb downstream 5185 true scaffold_7: 6467402-6472586 Theobroma cacao
Thecc1EG031715 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6467402-6468401 Theobroma cacao
Thecc1EG031715 2.0kb upstream 2.0kb upstream 6185 true scaffold_7: 6468402-6474586 Theobroma cacao
Thecc1EG031715 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6472587-6474586 Theobroma cacao
Thecc1EG031715 2.0kb downstream 2.0kb downstream 6185 true scaffold_7: 6466402-6472586 Theobroma cacao
Thecc1EG031715 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6466402-6468401 Theobroma cacao
Thecc1EG031715 5.0kb upstream 5.0kb upstream 9185 true scaffold_7: 6468402-6477586 Theobroma cacao
Thecc1EG031715 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6472587-6477586 Theobroma cacao
Thecc1EG031715 5.0kb downstream 5.0kb downstream 9185 true scaffold_7: 6463402-6472586 Theobroma cacao
Thecc1EG031715 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6463402-6468401 Theobroma cacao
Thecc1EG031715 10.0kb upstream 10.0kb upstream 14185 true scaffold_7: 6468402-6482586 Theobroma cacao
Thecc1EG031715 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6472587-6482586 Theobroma cacao
Thecc1EG031715 10.0kb downstream 10.0kb downstream 14185 true scaffold_7: 6458402-6472586 Theobroma cacao
Thecc1EG031715 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6458402-6468401 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840380 5264 Brassicales-Malvales View MSA
124342947 5266 SBM View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain