Gene : Thecc1EG030913 T. cacao v1.1
Defline:  (1 of 4) PTHR24012//PTHR24012:SF333 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  382
Name:  ? Thecc1EG030913 Secondary Identifier:  ? PAC:27446125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030913 0.5kb upstream 0.5kb upstream 5025 true scaffold_7: 1935740-1940764 Theobroma cacao
Thecc1EG030913 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1940265-1940764 Theobroma cacao
Thecc1EG030913 0.5kb downstream 0.5kb downstream 5025 true scaffold_7: 1935240-1940264 Theobroma cacao
Thecc1EG030913 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1935240-1935739 Theobroma cacao
Thecc1EG030913 1.0kb upstream 1.0kb upstream 5525 true scaffold_7: 1935740-1941264 Theobroma cacao
Thecc1EG030913 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1940265-1941264 Theobroma cacao
Thecc1EG030913 1.0kb downstream 1.0kb downstream 5525 true scaffold_7: 1934740-1940264 Theobroma cacao
Thecc1EG030913 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1934740-1935739 Theobroma cacao
Thecc1EG030913 2.0kb upstream 2.0kb upstream 6525 true scaffold_7: 1935740-1942264 Theobroma cacao
Thecc1EG030913 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1940265-1942264 Theobroma cacao
Thecc1EG030913 2.0kb downstream 2.0kb downstream 6525 true scaffold_7: 1933740-1940264 Theobroma cacao
Thecc1EG030913 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1933740-1935739 Theobroma cacao
Thecc1EG030913 5.0kb upstream 5.0kb upstream 9525 true scaffold_7: 1935740-1945264 Theobroma cacao
Thecc1EG030913 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1940265-1945264 Theobroma cacao
Thecc1EG030913 5.0kb downstream 5.0kb downstream 9525 true scaffold_7: 1930740-1940264 Theobroma cacao
Thecc1EG030913 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1930740-1935739 Theobroma cacao
Thecc1EG030913 10.0kb upstream 10.0kb upstream 14525 true scaffold_7: 1935740-1950264 Theobroma cacao
Thecc1EG030913 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1940265-1950264 Theobroma cacao
Thecc1EG030913 10.0kb downstream 10.0kb downstream 14525 true scaffold_7: 1925740-1940264 Theobroma cacao
Thecc1EG030913 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1925740-1935739 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841412 5264 Brassicales-Malvales View MSA
124350861 5266 SBM View MSA
124242646 5268 Malvidae View MSA
124066893 5270 Rosid View MSA
123742056 5271 Pentapetalae View MSA
122786744 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain