Gene : Thecc1EG028940 T. cacao v1.1
Defline:  (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) Genomic Order:  1032
Name:  ? Thecc1EG028940 Secondary Identifier:  ? PAC:27439474
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028940 0.5kb upstream 0.5kb upstream 4410 true scaffold_6: 19549933-19554342 Theobroma cacao
Thecc1EG028940 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19553843-19554342 Theobroma cacao
Thecc1EG028940 0.5kb downstream 0.5kb downstream 4410 true scaffold_6: 19549433-19553842 Theobroma cacao
Thecc1EG028940 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19549433-19549932 Theobroma cacao
Thecc1EG028940 1.0kb upstream 1.0kb upstream 4910 true scaffold_6: 19549933-19554842 Theobroma cacao
Thecc1EG028940 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19553843-19554842 Theobroma cacao
Thecc1EG028940 1.0kb downstream 1.0kb downstream 4910 true scaffold_6: 19548933-19553842 Theobroma cacao
Thecc1EG028940 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19548933-19549932 Theobroma cacao
Thecc1EG028940 2.0kb upstream 2.0kb upstream 5910 true scaffold_6: 19549933-19555842 Theobroma cacao
Thecc1EG028940 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19553843-19555842 Theobroma cacao
Thecc1EG028940 2.0kb downstream 2.0kb downstream 5910 true scaffold_6: 19547933-19553842 Theobroma cacao
Thecc1EG028940 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19547933-19549932 Theobroma cacao
Thecc1EG028940 5.0kb upstream 5.0kb upstream 8910 true scaffold_6: 19549933-19558842 Theobroma cacao
Thecc1EG028940 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19553843-19558842 Theobroma cacao
Thecc1EG028940 5.0kb downstream 5.0kb downstream 8910 true scaffold_6: 19544933-19553842 Theobroma cacao
Thecc1EG028940 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19544933-19549932 Theobroma cacao
Thecc1EG028940 10.0kb upstream 10.0kb upstream 13910 true scaffold_6: 19549933-19563842 Theobroma cacao
Thecc1EG028940 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19553843-19563842 Theobroma cacao
Thecc1EG028940 10.0kb downstream 10.0kb downstream 13910 true scaffold_6: 19539933-19553842 Theobroma cacao
Thecc1EG028940 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19539933-19549932 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833172 5264 Brassicales-Malvales View MSA
124345277 5266 SBM View MSA
124241920 5268 Malvidae View MSA
124065593 5270 Rosid View MSA
123740699 5271 Pentapetalae View MSA
122793501 5272 Eudicot View MSA
122048865 5273 Angiosperm View MSA
121348373 5274 Embryophyte View MSA
123425020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain