Gene : Thecc1EG026465 T. cacao v1.1
Defline:  (1 of 1) K11128 - H/ACA ribonucleoprotein complex subunit 1 (GAR1, NOLA1) Genomic Order:  2927
Name:  ? Thecc1EG026465 Secondary Identifier:  ? PAC:27423313
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG026465 0.5kb upstream 0.5kb upstream 1962 true scaffold_5: 38394039-38396000 Theobroma cacao
Thecc1EG026465 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 38394039-38394538 Theobroma cacao
Thecc1EG026465 0.5kb downstream 0.5kb downstream 1962 true scaffold_5: 38394539-38396500 Theobroma cacao
Thecc1EG026465 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 38396001-38396500 Theobroma cacao
Thecc1EG026465 1.0kb upstream 1.0kb upstream 2462 true scaffold_5: 38393539-38396000 Theobroma cacao
Thecc1EG026465 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 38393539-38394538 Theobroma cacao
Thecc1EG026465 1.0kb downstream 1.0kb downstream 2462 true scaffold_5: 38394539-38397000 Theobroma cacao
Thecc1EG026465 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 38396001-38397000 Theobroma cacao
Thecc1EG026465 2.0kb upstream 2.0kb upstream 3462 true scaffold_5: 38392539-38396000 Theobroma cacao
Thecc1EG026465 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 38392539-38394538 Theobroma cacao
Thecc1EG026465 2.0kb downstream 2.0kb downstream 3462 true scaffold_5: 38394539-38398000 Theobroma cacao
Thecc1EG026465 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 38396001-38398000 Theobroma cacao
Thecc1EG026465 5.0kb upstream 5.0kb upstream 6462 true scaffold_5: 38389539-38396000 Theobroma cacao
Thecc1EG026465 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 38389539-38394538 Theobroma cacao
Thecc1EG026465 5.0kb downstream 5.0kb downstream 6462 true scaffold_5: 38394539-38401000 Theobroma cacao
Thecc1EG026465 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 38396001-38401000 Theobroma cacao
Thecc1EG026465 10.0kb upstream 10.0kb upstream 11462 true scaffold_5: 38384539-38396000 Theobroma cacao
Thecc1EG026465 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 38384539-38394538 Theobroma cacao
Thecc1EG026465 10.0kb downstream 10.0kb downstream 11462 true scaffold_5: 38394539-38406000 Theobroma cacao
Thecc1EG026465 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 38396001-38406000 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837911 5264 Brassicales-Malvales View MSA
124322373 5266 SBM View MSA
124238669 5268 Malvidae View MSA
124060863 5270 Rosid View MSA
123746440 5271 Pentapetalae View MSA
122789002 5272 Eudicot View MSA
122045887 5273 Angiosperm View MSA
121346687 5274 Embryophyte View MSA
123425060 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain