Gene : Thecc1EG023110 T. cacao v1.1
Defline:  (1 of 1) PTHR22763//PTHR22763:SF19 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1077
Name:  ? Thecc1EG023110 Secondary Identifier:  ? PAC:27424594
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG023110 0.5kb upstream 0.5kb upstream 7320 true scaffold_5: 10527051-10534370 Theobroma cacao
Thecc1EG023110 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10533871-10534370 Theobroma cacao
Thecc1EG023110 0.5kb downstream 0.5kb downstream 7320 true scaffold_5: 10526551-10533870 Theobroma cacao
Thecc1EG023110 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10526551-10527050 Theobroma cacao
Thecc1EG023110 1.0kb upstream 1.0kb upstream 7820 true scaffold_5: 10527051-10534870 Theobroma cacao
Thecc1EG023110 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10533871-10534870 Theobroma cacao
Thecc1EG023110 1.0kb downstream 1.0kb downstream 7820 true scaffold_5: 10526051-10533870 Theobroma cacao
Thecc1EG023110 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10526051-10527050 Theobroma cacao
Thecc1EG023110 2.0kb upstream 2.0kb upstream 8820 true scaffold_5: 10527051-10535870 Theobroma cacao
Thecc1EG023110 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10533871-10535870 Theobroma cacao
Thecc1EG023110 2.0kb downstream 2.0kb downstream 8820 true scaffold_5: 10525051-10533870 Theobroma cacao
Thecc1EG023110 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10525051-10527050 Theobroma cacao
Thecc1EG023110 5.0kb upstream 5.0kb upstream 11820 true scaffold_5: 10527051-10538870 Theobroma cacao
Thecc1EG023110 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10533871-10538870 Theobroma cacao
Thecc1EG023110 5.0kb downstream 5.0kb downstream 11820 true scaffold_5: 10522051-10533870 Theobroma cacao
Thecc1EG023110 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10522051-10527050 Theobroma cacao
Thecc1EG023110 10.0kb upstream 10.0kb upstream 16820 true scaffold_5: 10527051-10543870 Theobroma cacao
Thecc1EG023110 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10533871-10543870 Theobroma cacao
Thecc1EG023110 10.0kb downstream 10.0kb downstream 16820 true scaffold_5: 10517051-10533870 Theobroma cacao
Thecc1EG023110 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10517051-10527050 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824108 5264 Brassicales-Malvales View MSA
124347284 5266 SBM View MSA
124253018 5268 Malvidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain