Gene : Thecc1EG022850 T. cacao v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF44 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  988
Name:  ? Thecc1EG022850 Secondary Identifier:  ? PAC:27421558
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022850 0.5kb upstream 0.5kb upstream 3385 true scaffold_5: 8088393-8091777 Theobroma cacao
Thecc1EG022850 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8088393-8088892 Theobroma cacao
Thecc1EG022850 0.5kb downstream 0.5kb downstream 3385 true scaffold_5: 8088893-8092277 Theobroma cacao
Thecc1EG022850 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8091778-8092277 Theobroma cacao
Thecc1EG022850 1.0kb upstream 1.0kb upstream 3885 true scaffold_5: 8087893-8091777 Theobroma cacao
Thecc1EG022850 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8087893-8088892 Theobroma cacao
Thecc1EG022850 1.0kb downstream 1.0kb downstream 3885 true scaffold_5: 8088893-8092777 Theobroma cacao
Thecc1EG022850 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8091778-8092777 Theobroma cacao
Thecc1EG022850 2.0kb upstream 2.0kb upstream 4885 true scaffold_5: 8086893-8091777 Theobroma cacao
Thecc1EG022850 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8086893-8088892 Theobroma cacao
Thecc1EG022850 2.0kb downstream 2.0kb downstream 4885 true scaffold_5: 8088893-8093777 Theobroma cacao
Thecc1EG022850 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8091778-8093777 Theobroma cacao
Thecc1EG022850 5.0kb upstream 5.0kb upstream 7885 true scaffold_5: 8083893-8091777 Theobroma cacao
Thecc1EG022850 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8083893-8088892 Theobroma cacao
Thecc1EG022850 5.0kb downstream 5.0kb downstream 7885 true scaffold_5: 8088893-8096777 Theobroma cacao
Thecc1EG022850 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8091778-8096777 Theobroma cacao
Thecc1EG022850 10.0kb upstream 10.0kb upstream 12885 true scaffold_5: 8078893-8091777 Theobroma cacao
Thecc1EG022850 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8078893-8088892 Theobroma cacao
Thecc1EG022850 10.0kb downstream 10.0kb downstream 12885 true scaffold_5: 8088893-8101777 Theobroma cacao
Thecc1EG022850 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8091778-8101777 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840690 5264 Brassicales-Malvales View MSA
124343958 5266 SBM View MSA
124254389 5268 Malvidae View MSA
124074738 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain