Gene : Thecc1EG022094 T. cacao v1.1

Defline:  (1 of 1) K03538 - ribonuclease P protein subunit POP4 (POP4, RPP29) Genomic Order:  523
Name:  ? Thecc1EG022094 Secondary Identifier:  ? PAC:27423468

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022094 0.5kb upstream 0.5kb upstream 4384 true scaffold_5: 2598713-2603096 Theobroma cacao
Thecc1EG022094 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2602597-2603096 Theobroma cacao
Thecc1EG022094 0.5kb downstream 0.5kb downstream 4384 true scaffold_5: 2598213-2602596 Theobroma cacao
Thecc1EG022094 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2598213-2598712 Theobroma cacao
Thecc1EG022094 1.0kb upstream 1.0kb upstream 4884 true scaffold_5: 2598713-2603596 Theobroma cacao
Thecc1EG022094 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2602597-2603596 Theobroma cacao
Thecc1EG022094 1.0kb downstream 1.0kb downstream 4884 true scaffold_5: 2597713-2602596 Theobroma cacao
Thecc1EG022094 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2597713-2598712 Theobroma cacao
Thecc1EG022094 2.0kb upstream 2.0kb upstream 5884 true scaffold_5: 2598713-2604596 Theobroma cacao
Thecc1EG022094 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2602597-2604596 Theobroma cacao
Thecc1EG022094 2.0kb downstream 2.0kb downstream 5884 true scaffold_5: 2596713-2602596 Theobroma cacao
Thecc1EG022094 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2596713-2598712 Theobroma cacao
Thecc1EG022094 5.0kb upstream 5.0kb upstream 8884 true scaffold_5: 2598713-2607596 Theobroma cacao
Thecc1EG022094 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2602597-2607596 Theobroma cacao
Thecc1EG022094 5.0kb downstream 5.0kb downstream 8884 true scaffold_5: 2593713-2602596 Theobroma cacao
Thecc1EG022094 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2593713-2598712 Theobroma cacao
Thecc1EG022094 10.0kb upstream 10.0kb upstream 13884 true scaffold_5: 2598713-2612596 Theobroma cacao
Thecc1EG022094 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2602597-2612596 Theobroma cacao
Thecc1EG022094 10.0kb downstream 10.0kb downstream 13884 true scaffold_5: 2588713-2602596 Theobroma cacao
Thecc1EG022094 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2588713-2598712 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041354 5273 Angiosperm View MSA
123838843 5264 Brassicales-Malvales View MSA
124336781 5266 SBM View MSA
124243179 5268 Malvidae View MSA
124061511 5270 Rosid View MSA
123737721 5271 Pentapetalae View MSA
122789849 5272 Eudicot View MSA
121347484 5274 Embryophyte View MSA
123427364 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain