Gene : Thecc1EG020958 T. cacao v1.1
Defline:  (1 of 7) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2634
Name:  ? Thecc1EG020958 Secondary Identifier:  ? PAC:27455825
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4942 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020958 0.5kb upstream 0.5kb upstream 34416 true scaffold_4: 31052895-31087310 Theobroma cacao
Thecc1EG020958 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31052895-31053394 Theobroma cacao
Thecc1EG020958 0.5kb downstream 0.5kb downstream 34416 true scaffold_4: 31053395-31087810 Theobroma cacao
Thecc1EG020958 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31087311-31087810 Theobroma cacao
Thecc1EG020958 1.0kb upstream 1.0kb upstream 34916 true scaffold_4: 31052395-31087310 Theobroma cacao
Thecc1EG020958 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31052395-31053394 Theobroma cacao
Thecc1EG020958 1.0kb downstream 1.0kb downstream 34916 true scaffold_4: 31053395-31088310 Theobroma cacao
Thecc1EG020958 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31087311-31088310 Theobroma cacao
Thecc1EG020958 2.0kb upstream 2.0kb upstream 35916 true scaffold_4: 31051395-31087310 Theobroma cacao
Thecc1EG020958 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31051395-31053394 Theobroma cacao
Thecc1EG020958 2.0kb downstream 2.0kb downstream 35916 true scaffold_4: 31053395-31089310 Theobroma cacao
Thecc1EG020958 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31087311-31089310 Theobroma cacao
Thecc1EG020958 5.0kb upstream 5.0kb upstream 38916 true scaffold_4: 31048395-31087310 Theobroma cacao
Thecc1EG020958 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31048395-31053394 Theobroma cacao
Thecc1EG020958 5.0kb downstream 5.0kb downstream 38916 true scaffold_4: 31053395-31092310 Theobroma cacao
Thecc1EG020958 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31087311-31092310 Theobroma cacao
Thecc1EG020958 10.0kb upstream 10.0kb upstream 43916 true scaffold_4: 31043395-31087310 Theobroma cacao
Thecc1EG020958 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31043395-31053394 Theobroma cacao
Thecc1EG020958 10.0kb downstream 10.0kb downstream 43916 true scaffold_4: 31053395-31097310 Theobroma cacao
Thecc1EG020958 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31087311-31097310 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030660 5273 Angiosperm View MSA
123842485 5264 Brassicales-Malvales View MSA
124352037 5266 SBM View MSA
124254871 5268 Malvidae View MSA
124075343 5270 Rosid View MSA
123744951 5271 Pentapetalae View MSA
122771311 5272 Eudicot View MSA
121299805 5274 Embryophyte View MSA
123337640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain