Gene : Thecc1EG020549 T. cacao v1.1
Defline:  (1 of 1) PTHR22763//PTHR22763:SF65 - RING ZINC FINGER PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RHF1A Genomic Order:  2282
Name:  ? Thecc1EG020549 Secondary Identifier:  ? PAC:27451836
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020549 0.5kb upstream 0.5kb upstream 4864 true scaffold_4: 29066168-29071031 Theobroma cacao
Thecc1EG020549 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 29070532-29071031 Theobroma cacao
Thecc1EG020549 0.5kb downstream 0.5kb downstream 4864 true scaffold_4: 29065668-29070531 Theobroma cacao
Thecc1EG020549 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 29065668-29066167 Theobroma cacao
Thecc1EG020549 1.0kb upstream 1.0kb upstream 5364 true scaffold_4: 29066168-29071531 Theobroma cacao
Thecc1EG020549 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 29070532-29071531 Theobroma cacao
Thecc1EG020549 1.0kb downstream 1.0kb downstream 5364 true scaffold_4: 29065168-29070531 Theobroma cacao
Thecc1EG020549 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 29065168-29066167 Theobroma cacao
Thecc1EG020549 2.0kb upstream 2.0kb upstream 6364 true scaffold_4: 29066168-29072531 Theobroma cacao
Thecc1EG020549 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 29070532-29072531 Theobroma cacao
Thecc1EG020549 2.0kb downstream 2.0kb downstream 6364 true scaffold_4: 29064168-29070531 Theobroma cacao
Thecc1EG020549 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 29064168-29066167 Theobroma cacao
Thecc1EG020549 5.0kb upstream 5.0kb upstream 9364 true scaffold_4: 29066168-29075531 Theobroma cacao
Thecc1EG020549 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 29070532-29075531 Theobroma cacao
Thecc1EG020549 5.0kb downstream 5.0kb downstream 9364 true scaffold_4: 29061168-29070531 Theobroma cacao
Thecc1EG020549 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 29061168-29066167 Theobroma cacao
Thecc1EG020549 10.0kb upstream 10.0kb upstream 14364 true scaffold_4: 29066168-29080531 Theobroma cacao
Thecc1EG020549 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 29070532-29080531 Theobroma cacao
Thecc1EG020549 10.0kb downstream 10.0kb downstream 14364 true scaffold_4: 29056168-29070531 Theobroma cacao
Thecc1EG020549 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 29056168-29066167 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791776 5273 Angiosperm View MSA
123827738 5264 Brassicales-Malvales View MSA
124345942 5266 SBM View MSA
124237731 5268 Malvidae View MSA
124067987 5270 Rosid View MSA
123741405 5271 Pentapetalae View MSA
122791979 5272 Eudicot View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain