Gene : Thecc1EG020300 T. cacao v1.1
Defline:  (1 of 2) PTHR13711:SF213 - PROTEIN HMG-20 Genomic Order:  2063
Name:  ? Thecc1EG020300 Secondary Identifier:  ? PAC:27452987
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020300 0.5kb upstream 0.5kb upstream 6794 true scaffold_4: 27769743-27776536 Theobroma cacao
Thecc1EG020300 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27769743-27770242 Theobroma cacao
Thecc1EG020300 0.5kb downstream 0.5kb downstream 6794 true scaffold_4: 27770243-27777036 Theobroma cacao
Thecc1EG020300 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27776537-27777036 Theobroma cacao
Thecc1EG020300 1.0kb upstream 1.0kb upstream 7294 true scaffold_4: 27769243-27776536 Theobroma cacao
Thecc1EG020300 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27769243-27770242 Theobroma cacao
Thecc1EG020300 1.0kb downstream 1.0kb downstream 7294 true scaffold_4: 27770243-27777536 Theobroma cacao
Thecc1EG020300 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27776537-27777536 Theobroma cacao
Thecc1EG020300 2.0kb upstream 2.0kb upstream 8294 true scaffold_4: 27768243-27776536 Theobroma cacao
Thecc1EG020300 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27768243-27770242 Theobroma cacao
Thecc1EG020300 2.0kb downstream 2.0kb downstream 8294 true scaffold_4: 27770243-27778536 Theobroma cacao
Thecc1EG020300 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27776537-27778536 Theobroma cacao
Thecc1EG020300 5.0kb upstream 5.0kb upstream 11294 true scaffold_4: 27765243-27776536 Theobroma cacao
Thecc1EG020300 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27765243-27770242 Theobroma cacao
Thecc1EG020300 5.0kb downstream 5.0kb downstream 11294 true scaffold_4: 27770243-27781536 Theobroma cacao
Thecc1EG020300 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27776537-27781536 Theobroma cacao
Thecc1EG020300 10.0kb upstream 10.0kb upstream 16294 true scaffold_4: 27760243-27776536 Theobroma cacao
Thecc1EG020300 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27760243-27770242 Theobroma cacao
Thecc1EG020300 10.0kb downstream 10.0kb downstream 16294 true scaffold_4: 27770243-27786536 Theobroma cacao
Thecc1EG020300 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27776537-27786536 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842525 5264 Brassicales-Malvales View MSA
124323567 5266 SBM View MSA
124169535 5268 Malvidae View MSA
124071278 5270 Rosid View MSA
123745117 5271 Pentapetalae View MSA
122793766 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain