Gene : Thecc1EG020185 T. cacao v1.1
Defline:  Recombination initiation defect 1 Genomic Order:  1963
Name:  ? Thecc1EG020185 Secondary Identifier:  ? PAC:27454844
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG020185 0.5kb upstream 0.5kb upstream 7635 true scaffold_4: 27160931-27168565 Theobroma cacao
Thecc1EG020185 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 27160931-27161430 Theobroma cacao
Thecc1EG020185 0.5kb downstream 0.5kb downstream 7635 true scaffold_4: 27161431-27169065 Theobroma cacao
Thecc1EG020185 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 27168566-27169065 Theobroma cacao
Thecc1EG020185 1.0kb upstream 1.0kb upstream 8135 true scaffold_4: 27160431-27168565 Theobroma cacao
Thecc1EG020185 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 27160431-27161430 Theobroma cacao
Thecc1EG020185 1.0kb downstream 1.0kb downstream 8135 true scaffold_4: 27161431-27169565 Theobroma cacao
Thecc1EG020185 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 27168566-27169565 Theobroma cacao
Thecc1EG020185 2.0kb upstream 2.0kb upstream 9135 true scaffold_4: 27159431-27168565 Theobroma cacao
Thecc1EG020185 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 27159431-27161430 Theobroma cacao
Thecc1EG020185 2.0kb downstream 2.0kb downstream 9135 true scaffold_4: 27161431-27170565 Theobroma cacao
Thecc1EG020185 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 27168566-27170565 Theobroma cacao
Thecc1EG020185 5.0kb upstream 5.0kb upstream 12135 true scaffold_4: 27156431-27168565 Theobroma cacao
Thecc1EG020185 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 27156431-27161430 Theobroma cacao
Thecc1EG020185 5.0kb downstream 5.0kb downstream 12135 true scaffold_4: 27161431-27173565 Theobroma cacao
Thecc1EG020185 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 27168566-27173565 Theobroma cacao
Thecc1EG020185 10.0kb upstream 10.0kb upstream 17135 true scaffold_4: 27151431-27168565 Theobroma cacao
Thecc1EG020185 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 27151431-27161430 Theobroma cacao
Thecc1EG020185 10.0kb downstream 10.0kb downstream 17135 true scaffold_4: 27161431-27178565 Theobroma cacao
Thecc1EG020185 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 27168566-27178565 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830400 5264 Brassicales-Malvales View MSA
124343343 5266 SBM View MSA
124238780 5268 Malvidae View MSA
124062223 5270 Rosid View MSA
123738846 5271 Pentapetalae View MSA
122788362 5272 Eudicot View MSA
122051079 5273 Angiosperm View MSA
121346091 5274 Embryophyte View MSA
123380325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain