Gene : Thecc1EG018986 T. cacao v1.1
Defline:  (1 of 2) PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1108
Name:  ? Thecc1EG018986 Secondary Identifier:  ? PAC:27452746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG018986 0.5kb upstream 0.5kb upstream 5552 true scaffold_4: 19386553-19392104 Theobroma cacao
Thecc1EG018986 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19391605-19392104 Theobroma cacao
Thecc1EG018986 0.5kb downstream 0.5kb downstream 5552 true scaffold_4: 19386053-19391604 Theobroma cacao
Thecc1EG018986 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19386053-19386552 Theobroma cacao
Thecc1EG018986 1.0kb upstream 1.0kb upstream 6052 true scaffold_4: 19386553-19392604 Theobroma cacao
Thecc1EG018986 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19391605-19392604 Theobroma cacao
Thecc1EG018986 1.0kb downstream 1.0kb downstream 6052 true scaffold_4: 19385553-19391604 Theobroma cacao
Thecc1EG018986 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19385553-19386552 Theobroma cacao
Thecc1EG018986 2.0kb upstream 2.0kb upstream 7052 true scaffold_4: 19386553-19393604 Theobroma cacao
Thecc1EG018986 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19391605-19393604 Theobroma cacao
Thecc1EG018986 2.0kb downstream 2.0kb downstream 7052 true scaffold_4: 19384553-19391604 Theobroma cacao
Thecc1EG018986 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19384553-19386552 Theobroma cacao
Thecc1EG018986 5.0kb upstream 5.0kb upstream 10052 true scaffold_4: 19386553-19396604 Theobroma cacao
Thecc1EG018986 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19391605-19396604 Theobroma cacao
Thecc1EG018986 5.0kb downstream 5.0kb downstream 10052 true scaffold_4: 19381553-19391604 Theobroma cacao
Thecc1EG018986 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19381553-19386552 Theobroma cacao
Thecc1EG018986 10.0kb upstream 10.0kb upstream 15052 true scaffold_4: 19386553-19401604 Theobroma cacao
Thecc1EG018986 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19391605-19401604 Theobroma cacao
Thecc1EG018986 10.0kb downstream 10.0kb downstream 15052 true scaffold_4: 19376553-19391604 Theobroma cacao
Thecc1EG018986 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19376553-19386552 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838764 5264 Brassicales-Malvales View MSA
124340119 5266 SBM View MSA
124251638 5268 Malvidae View MSA
124064402 5270 Rosid View MSA
123745237 5271 Pentapetalae View MSA
122788108 5272 Eudicot View MSA
122046518 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121345645 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain