Gene : Thecc1EG016476 T. cacao v1.1
Defline:  Pentatricopeptide repeat superfamily protein (66%P) Genomic Order:  2941
Name:  ? Thecc1EG016476 Secondary Identifier:  ? PAC:27451516
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG016476 0.5kb upstream 0.5kb upstream 6671 true scaffold_3: 33033517-33040187 Theobroma cacao
Thecc1EG016476 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 33033517-33034016 Theobroma cacao
Thecc1EG016476 0.5kb downstream 0.5kb downstream 6671 true scaffold_3: 33034017-33040687 Theobroma cacao
Thecc1EG016476 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 33040188-33040687 Theobroma cacao
Thecc1EG016476 1.0kb upstream 1.0kb upstream 7171 true scaffold_3: 33033017-33040187 Theobroma cacao
Thecc1EG016476 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 33033017-33034016 Theobroma cacao
Thecc1EG016476 1.0kb downstream 1.0kb downstream 7171 true scaffold_3: 33034017-33041187 Theobroma cacao
Thecc1EG016476 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 33040188-33041187 Theobroma cacao
Thecc1EG016476 2.0kb upstream 2.0kb upstream 8171 true scaffold_3: 33032017-33040187 Theobroma cacao
Thecc1EG016476 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 33032017-33034016 Theobroma cacao
Thecc1EG016476 2.0kb downstream 2.0kb downstream 8171 true scaffold_3: 33034017-33042187 Theobroma cacao
Thecc1EG016476 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 33040188-33042187 Theobroma cacao
Thecc1EG016476 5.0kb upstream 5.0kb upstream 11171 true scaffold_3: 33029017-33040187 Theobroma cacao
Thecc1EG016476 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 33029017-33034016 Theobroma cacao
Thecc1EG016476 5.0kb downstream 5.0kb downstream 11171 true scaffold_3: 33034017-33045187 Theobroma cacao
Thecc1EG016476 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 33040188-33045187 Theobroma cacao
Thecc1EG016476 10.0kb upstream 10.0kb upstream 16171 true scaffold_3: 33024017-33040187 Theobroma cacao
Thecc1EG016476 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 33024017-33034016 Theobroma cacao
Thecc1EG016476 10.0kb downstream 10.0kb downstream 16171 true scaffold_3: 33034017-33050187 Theobroma cacao
Thecc1EG016476 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 33040188-33050187 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829022 5264 Brassicales-Malvales View MSA
124336831 5266 SBM View MSA
124248100 5268 Malvidae View MSA
124066809 5270 Rosid View MSA
123736501 5271 Pentapetalae View MSA
122790212 5272 Eudicot View MSA
122042268 5273 Angiosperm View MSA
121347908 5274 Embryophyte View MSA
123425074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain