Gene : Thecc1EG013357 T. cacao v1.1

Defline:  (1 of 1) PTHR10641:SF665 - MYB TRANSCRIPTION FACTOR Genomic Order:  694
Name:  ? Thecc1EG013357 Secondary Identifier:  ? PAC:27449518

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG013357 0.5kb upstream 0.5kb upstream 2450 true scaffold_3: 12177129-12179578 Theobroma cacao
Thecc1EG013357 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12179079-12179578 Theobroma cacao
Thecc1EG013357 0.5kb downstream 0.5kb downstream 2450 true scaffold_3: 12176629-12179078 Theobroma cacao
Thecc1EG013357 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12176629-12177128 Theobroma cacao
Thecc1EG013357 1.0kb upstream 1.0kb upstream 2950 true scaffold_3: 12177129-12180078 Theobroma cacao
Thecc1EG013357 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12179079-12180078 Theobroma cacao
Thecc1EG013357 1.0kb downstream 1.0kb downstream 2950 true scaffold_3: 12176129-12179078 Theobroma cacao
Thecc1EG013357 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12176129-12177128 Theobroma cacao
Thecc1EG013357 2.0kb upstream 2.0kb upstream 3950 true scaffold_3: 12177129-12181078 Theobroma cacao
Thecc1EG013357 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12179079-12181078 Theobroma cacao
Thecc1EG013357 2.0kb downstream 2.0kb downstream 3950 true scaffold_3: 12175129-12179078 Theobroma cacao
Thecc1EG013357 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12175129-12177128 Theobroma cacao
Thecc1EG013357 5.0kb upstream 5.0kb upstream 6950 true scaffold_3: 12177129-12184078 Theobroma cacao
Thecc1EG013357 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12179079-12184078 Theobroma cacao
Thecc1EG013357 5.0kb downstream 5.0kb downstream 6950 true scaffold_3: 12172129-12179078 Theobroma cacao
Thecc1EG013357 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12172129-12177128 Theobroma cacao
Thecc1EG013357 10.0kb upstream 10.0kb upstream 11950 true scaffold_3: 12177129-12189078 Theobroma cacao
Thecc1EG013357 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12179079-12189078 Theobroma cacao
Thecc1EG013357 10.0kb downstream 10.0kb downstream 11950 true scaffold_3: 12167129-12179078 Theobroma cacao
Thecc1EG013357 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12167129-12177128 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840498 5264 Brassicales-Malvales View MSA
124346263 5266 SBM View MSA
124250274 5268 Malvidae View MSA
124070030 5270 Rosid View MSA
123748583 5271 Pentapetalae View MSA
122795051 5272 Eudicot View MSA
122048858 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351453 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain