Gene : Thecc1EG046023 T. cacao v1.1
Defline:  (1 of 81) PF00560//PF08263//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  14
Name:  ? Thecc1EG046023 Secondary Identifier:  ? PAC:27425561
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046023 0.5kb upstream 0.5kb upstream 8266 true scaffold_26: 108238-116503 Theobroma cacao
Thecc1EG046023 0.5kb upstream 0.5kb upstream 500 false scaffold_26: 108238-108737 Theobroma cacao
Thecc1EG046023 0.5kb downstream 0.5kb downstream 8266 true scaffold_26: 108738-117003 Theobroma cacao
Thecc1EG046023 0.5kb downstream 0.5kb downstream 500 false scaffold_26: 116504-117003 Theobroma cacao
Thecc1EG046023 1.0kb upstream 1.0kb upstream 8766 true scaffold_26: 107738-116503 Theobroma cacao
Thecc1EG046023 1.0kb upstream 1.0kb upstream 1000 false scaffold_26: 107738-108737 Theobroma cacao
Thecc1EG046023 1.0kb downstream 1.0kb downstream 8766 true scaffold_26: 108738-117503 Theobroma cacao
Thecc1EG046023 1.0kb downstream 1.0kb downstream 1000 false scaffold_26: 116504-117503 Theobroma cacao
Thecc1EG046023 2.0kb upstream 2.0kb upstream 9766 true scaffold_26: 106738-116503 Theobroma cacao
Thecc1EG046023 2.0kb upstream 2.0kb upstream 2000 false scaffold_26: 106738-108737 Theobroma cacao
Thecc1EG046023 2.0kb downstream 2.0kb downstream 9766 true scaffold_26: 108738-118503 Theobroma cacao
Thecc1EG046023 2.0kb downstream 2.0kb downstream 2000 false scaffold_26: 116504-118503 Theobroma cacao
Thecc1EG046023 5.0kb upstream 5.0kb upstream 12766 true scaffold_26: 103738-116503 Theobroma cacao
Thecc1EG046023 5.0kb upstream 5.0kb upstream 5000 false scaffold_26: 103738-108737 Theobroma cacao
Thecc1EG046023 5.0kb downstream 5.0kb downstream 12766 true scaffold_26: 108738-121503 Theobroma cacao
Thecc1EG046023 5.0kb downstream 5.0kb downstream 5000 false scaffold_26: 116504-121503 Theobroma cacao
Thecc1EG046023 10.0kb upstream 10.0kb upstream 17766 true scaffold_26: 98738-116503 Theobroma cacao
Thecc1EG046023 10.0kb upstream 10.0kb upstream 10000 false scaffold_26: 98738-108737 Theobroma cacao
Thecc1EG046023 10.0kb downstream 10.0kb downstream 16425 true scaffold_26: 108738-125162 Theobroma cacao
Thecc1EG046023 10.0kb downstream 10.0kb downstream 8659 false scaffold_26: 116504-125162 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841758 5264 Brassicales-Malvales View MSA
124323009 5266 SBM View MSA
124254705 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain