Gene : Thecc1EG011998 T. cacao v1.1
Defline:  (1 of 1) PTHR11119:SF48 - NUCLEOBASE-ASCORBATE TRANSPORTER 5-RELATED Genomic Order:  58
Name:  ? Thecc1EG011998 Secondary Identifier:  ? PAC:27449362
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011998 0.5kb upstream 0.5kb upstream 7330 true scaffold_3: 375887-383216 Theobroma cacao
Thecc1EG011998 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 382717-383216 Theobroma cacao
Thecc1EG011998 0.5kb downstream 0.5kb downstream 7330 true scaffold_3: 375387-382716 Theobroma cacao
Thecc1EG011998 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 375387-375886 Theobroma cacao
Thecc1EG011998 1.0kb upstream 1.0kb upstream 7830 true scaffold_3: 375887-383716 Theobroma cacao
Thecc1EG011998 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 382717-383716 Theobroma cacao
Thecc1EG011998 1.0kb downstream 1.0kb downstream 7830 true scaffold_3: 374887-382716 Theobroma cacao
Thecc1EG011998 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 374887-375886 Theobroma cacao
Thecc1EG011998 2.0kb upstream 2.0kb upstream 8830 true scaffold_3: 375887-384716 Theobroma cacao
Thecc1EG011998 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 382717-384716 Theobroma cacao
Thecc1EG011998 2.0kb downstream 2.0kb downstream 8830 true scaffold_3: 373887-382716 Theobroma cacao
Thecc1EG011998 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 373887-375886 Theobroma cacao
Thecc1EG011998 5.0kb upstream 5.0kb upstream 11830 true scaffold_3: 375887-387716 Theobroma cacao
Thecc1EG011998 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 382717-387716 Theobroma cacao
Thecc1EG011998 5.0kb downstream 5.0kb downstream 11830 true scaffold_3: 370887-382716 Theobroma cacao
Thecc1EG011998 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 370887-375886 Theobroma cacao
Thecc1EG011998 10.0kb upstream 10.0kb upstream 16830 true scaffold_3: 375887-392716 Theobroma cacao
Thecc1EG011998 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 382717-392716 Theobroma cacao
Thecc1EG011998 10.0kb downstream 10.0kb downstream 16830 true scaffold_3: 365887-382716 Theobroma cacao
Thecc1EG011998 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 365887-375886 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836359 5264 Brassicales-Malvales View MSA
124350259 5266 SBM View MSA
124237860 5268 Malvidae View MSA
124067903 5270 Rosid View MSA
123745351 5271 Pentapetalae View MSA
122794781 5272 Eudicot View MSA
122049429 5273 Angiosperm View MSA
121311395 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain