Gene : Thecc1EG011288 T. cacao v1.1
Defline:  (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3090
Name:  ? Thecc1EG011288 Secondary Identifier:  ? PAC:27461211
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011288 0.5kb upstream 0.5kb upstream 4860 true scaffold_2: 39211905-39216764 Theobroma cacao
Thecc1EG011288 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39211905-39212404 Theobroma cacao
Thecc1EG011288 0.5kb downstream 0.5kb downstream 4860 true scaffold_2: 39212405-39217264 Theobroma cacao
Thecc1EG011288 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39216765-39217264 Theobroma cacao
Thecc1EG011288 1.0kb upstream 1.0kb upstream 5360 true scaffold_2: 39211405-39216764 Theobroma cacao
Thecc1EG011288 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39211405-39212404 Theobroma cacao
Thecc1EG011288 1.0kb downstream 1.0kb downstream 5360 true scaffold_2: 39212405-39217764 Theobroma cacao
Thecc1EG011288 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39216765-39217764 Theobroma cacao
Thecc1EG011288 2.0kb upstream 2.0kb upstream 6360 true scaffold_2: 39210405-39216764 Theobroma cacao
Thecc1EG011288 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39210405-39212404 Theobroma cacao
Thecc1EG011288 2.0kb downstream 2.0kb downstream 6360 true scaffold_2: 39212405-39218764 Theobroma cacao
Thecc1EG011288 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39216765-39218764 Theobroma cacao
Thecc1EG011288 5.0kb upstream 5.0kb upstream 9360 true scaffold_2: 39207405-39216764 Theobroma cacao
Thecc1EG011288 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39207405-39212404 Theobroma cacao
Thecc1EG011288 5.0kb downstream 5.0kb downstream 9360 true scaffold_2: 39212405-39221764 Theobroma cacao
Thecc1EG011288 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39216765-39221764 Theobroma cacao
Thecc1EG011288 10.0kb upstream 10.0kb upstream 14360 true scaffold_2: 39202405-39216764 Theobroma cacao
Thecc1EG011288 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39202405-39212404 Theobroma cacao
Thecc1EG011288 10.0kb downstream 10.0kb downstream 14360 true scaffold_2: 39212405-39226764 Theobroma cacao
Thecc1EG011288 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39216765-39226764 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831117 5264 Brassicales-Malvales View MSA
124341027 5266 SBM View MSA
124242407 5268 Malvidae View MSA
124060540 5270 Rosid View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain