Gene : Thecc1EG011282 T. cacao v1.1

Defline:  (1 of 3) K11314 - transcriptional adapter 2-alpha (TADA2A, ADA2) Genomic Order:  3084
Name:  ? Thecc1EG011282 Secondary Identifier:  ? PAC:27463358

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011282 0.5kb upstream 0.5kb upstream 12859 true scaffold_2: 39171238-39184096 Theobroma cacao
Thecc1EG011282 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39171238-39171737 Theobroma cacao
Thecc1EG011282 0.5kb downstream 0.5kb downstream 12859 true scaffold_2: 39171738-39184596 Theobroma cacao
Thecc1EG011282 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39184097-39184596 Theobroma cacao
Thecc1EG011282 1.0kb upstream 1.0kb upstream 13359 true scaffold_2: 39170738-39184096 Theobroma cacao
Thecc1EG011282 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39170738-39171737 Theobroma cacao
Thecc1EG011282 1.0kb downstream 1.0kb downstream 13359 true scaffold_2: 39171738-39185096 Theobroma cacao
Thecc1EG011282 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39184097-39185096 Theobroma cacao
Thecc1EG011282 2.0kb upstream 2.0kb upstream 14359 true scaffold_2: 39169738-39184096 Theobroma cacao
Thecc1EG011282 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39169738-39171737 Theobroma cacao
Thecc1EG011282 2.0kb downstream 2.0kb downstream 14359 true scaffold_2: 39171738-39186096 Theobroma cacao
Thecc1EG011282 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39184097-39186096 Theobroma cacao
Thecc1EG011282 5.0kb upstream 5.0kb upstream 17359 true scaffold_2: 39166738-39184096 Theobroma cacao
Thecc1EG011282 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39166738-39171737 Theobroma cacao
Thecc1EG011282 5.0kb downstream 5.0kb downstream 17359 true scaffold_2: 39171738-39189096 Theobroma cacao
Thecc1EG011282 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39184097-39189096 Theobroma cacao
Thecc1EG011282 10.0kb upstream 10.0kb upstream 22359 true scaffold_2: 39161738-39184096 Theobroma cacao
Thecc1EG011282 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39161738-39171737 Theobroma cacao
Thecc1EG011282 10.0kb downstream 10.0kb downstream 22359 true scaffold_2: 39171738-39194096 Theobroma cacao
Thecc1EG011282 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39184097-39194096 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829864 5264 Brassicales-Malvales View MSA
124346197 5266 SBM View MSA
124241033 5268 Malvidae View MSA
124064088 5270 Rosid View MSA
123743147 5271 Pentapetalae View MSA
122791432 5272 Eudicot View MSA
122047628 5273 Angiosperm View MSA
121346644 5274 Embryophyte View MSA
123425030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain