Gene : Thecc1EG010986 T. cacao v1.1

Defline:  (1 of 1) PTHR22298//PTHR22298:SF28 - ENDO-1,4-BETA-GLUCANASE // ENDOGLUCANASE 4-RELATED Genomic Order:  2883
Name:  ? Thecc1EG010986 Secondary Identifier:  ? PAC:27460603

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010986 0.5kb upstream 0.5kb upstream 5547 true scaffold_2: 37147756-37153302 Theobroma cacao
Thecc1EG010986 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 37147756-37148255 Theobroma cacao
Thecc1EG010986 0.5kb downstream 0.5kb downstream 5547 true scaffold_2: 37148256-37153802 Theobroma cacao
Thecc1EG010986 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 37153303-37153802 Theobroma cacao
Thecc1EG010986 1.0kb upstream 1.0kb upstream 6047 true scaffold_2: 37147256-37153302 Theobroma cacao
Thecc1EG010986 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 37147256-37148255 Theobroma cacao
Thecc1EG010986 1.0kb downstream 1.0kb downstream 6047 true scaffold_2: 37148256-37154302 Theobroma cacao
Thecc1EG010986 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 37153303-37154302 Theobroma cacao
Thecc1EG010986 2.0kb upstream 2.0kb upstream 7047 true scaffold_2: 37146256-37153302 Theobroma cacao
Thecc1EG010986 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 37146256-37148255 Theobroma cacao
Thecc1EG010986 2.0kb downstream 2.0kb downstream 7047 true scaffold_2: 37148256-37155302 Theobroma cacao
Thecc1EG010986 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 37153303-37155302 Theobroma cacao
Thecc1EG010986 5.0kb upstream 5.0kb upstream 10047 true scaffold_2: 37143256-37153302 Theobroma cacao
Thecc1EG010986 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 37143256-37148255 Theobroma cacao
Thecc1EG010986 5.0kb downstream 5.0kb downstream 10047 true scaffold_2: 37148256-37158302 Theobroma cacao
Thecc1EG010986 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 37153303-37158302 Theobroma cacao
Thecc1EG010986 10.0kb upstream 10.0kb upstream 15047 true scaffold_2: 37138256-37153302 Theobroma cacao
Thecc1EG010986 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 37138256-37148255 Theobroma cacao
Thecc1EG010986 10.0kb downstream 10.0kb downstream 15047 true scaffold_2: 37148256-37163302 Theobroma cacao
Thecc1EG010986 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 37153303-37163302 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831253 5264 Brassicales-Malvales View MSA
124351007 5266 SBM View MSA
124243327 5268 Malvidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain