Gene : Thecc1EG010413 T. cacao v1.1
Defline:  (1 of 1) K02977//K08770 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) // ubiquitin C (UBC) Genomic Order:  2543
Name:  ? Thecc1EG010413 Secondary Identifier:  ? PAC:27462557
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010413 0.5kb upstream 0.5kb upstream 2271 true scaffold_2: 33241791-33244061 Theobroma cacao
Thecc1EG010413 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33243562-33244061 Theobroma cacao
Thecc1EG010413 0.5kb downstream 0.5kb downstream 2271 true scaffold_2: 33241291-33243561 Theobroma cacao
Thecc1EG010413 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33241291-33241790 Theobroma cacao
Thecc1EG010413 1.0kb upstream 1.0kb upstream 2771 true scaffold_2: 33241791-33244561 Theobroma cacao
Thecc1EG010413 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33243562-33244561 Theobroma cacao
Thecc1EG010413 1.0kb downstream 1.0kb downstream 2771 true scaffold_2: 33240791-33243561 Theobroma cacao
Thecc1EG010413 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33240791-33241790 Theobroma cacao
Thecc1EG010413 2.0kb upstream 2.0kb upstream 3771 true scaffold_2: 33241791-33245561 Theobroma cacao
Thecc1EG010413 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33243562-33245561 Theobroma cacao
Thecc1EG010413 2.0kb downstream 2.0kb downstream 3771 true scaffold_2: 33239791-33243561 Theobroma cacao
Thecc1EG010413 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33239791-33241790 Theobroma cacao
Thecc1EG010413 5.0kb upstream 5.0kb upstream 6771 true scaffold_2: 33241791-33248561 Theobroma cacao
Thecc1EG010413 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33243562-33248561 Theobroma cacao
Thecc1EG010413 5.0kb downstream 5.0kb downstream 6771 true scaffold_2: 33236791-33243561 Theobroma cacao
Thecc1EG010413 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33236791-33241790 Theobroma cacao
Thecc1EG010413 10.0kb upstream 10.0kb upstream 11771 true scaffold_2: 33241791-33253561 Theobroma cacao
Thecc1EG010413 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33243562-33253561 Theobroma cacao
Thecc1EG010413 10.0kb downstream 10.0kb downstream 11771 true scaffold_2: 33231791-33243561 Theobroma cacao
Thecc1EG010413 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33231791-33241790 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837397 5264 Brassicales-Malvales View MSA
124350207 5266 SBM View MSA
124254445 5268 Malvidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain