Gene : Thecc1EG010450 T. cacao v1.1
Defline:  (1 of 1) PTHR31375//PTHR31375:SF12 - FAMILY NOT NAMED // POLYGALACTURONASE Genomic Order:  2560
Name:  ? Thecc1EG010450 Secondary Identifier:  ? PAC:27463575
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010450 0.5kb upstream 0.5kb upstream 4964 true scaffold_2: 33491468-33496431 Theobroma cacao
Thecc1EG010450 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33491468-33491967 Theobroma cacao
Thecc1EG010450 0.5kb downstream 0.5kb downstream 4964 true scaffold_2: 33491968-33496931 Theobroma cacao
Thecc1EG010450 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33496432-33496931 Theobroma cacao
Thecc1EG010450 1.0kb upstream 1.0kb upstream 5464 true scaffold_2: 33490968-33496431 Theobroma cacao
Thecc1EG010450 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33490968-33491967 Theobroma cacao
Thecc1EG010450 1.0kb downstream 1.0kb downstream 5464 true scaffold_2: 33491968-33497431 Theobroma cacao
Thecc1EG010450 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33496432-33497431 Theobroma cacao
Thecc1EG010450 2.0kb upstream 2.0kb upstream 6464 true scaffold_2: 33489968-33496431 Theobroma cacao
Thecc1EG010450 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33489968-33491967 Theobroma cacao
Thecc1EG010450 2.0kb downstream 2.0kb downstream 6464 true scaffold_2: 33491968-33498431 Theobroma cacao
Thecc1EG010450 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33496432-33498431 Theobroma cacao
Thecc1EG010450 5.0kb upstream 5.0kb upstream 9464 true scaffold_2: 33486968-33496431 Theobroma cacao
Thecc1EG010450 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33486968-33491967 Theobroma cacao
Thecc1EG010450 5.0kb downstream 5.0kb downstream 9464 true scaffold_2: 33491968-33501431 Theobroma cacao
Thecc1EG010450 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33496432-33501431 Theobroma cacao
Thecc1EG010450 10.0kb upstream 10.0kb upstream 14464 true scaffold_2: 33481968-33496431 Theobroma cacao
Thecc1EG010450 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33481968-33491967 Theobroma cacao
Thecc1EG010450 10.0kb downstream 10.0kb downstream 14464 true scaffold_2: 33491968-33506431 Theobroma cacao
Thecc1EG010450 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33496432-33506431 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837040 5264 Brassicales-Malvales View MSA
124346995 5266 SBM View MSA
124246372 5268 Malvidae View MSA
124069219 5270 Rosid View MSA
123747180 5271 Pentapetalae View MSA
122794400 5272 Eudicot View MSA
122048606 5273 Angiosperm View MSA
121311036 5274 Embryophyte View MSA
123348390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain