Gene : Thecc1EG043307 T. cacao v1.1
Defline:  (1 of 2) K12193 - charged multivesicular body protein 3 (VPS24, CHMP3) Genomic Order:  813
Name:  ? Thecc1EG043307 Secondary Identifier:  ? PAC:27443555
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043307 0.5kb upstream 0.5kb upstream 4508 true scaffold_10r: 5114346-5118853 Theobroma cacao
Thecc1EG043307 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 5118354-5118853 Theobroma cacao
Thecc1EG043307 0.5kb downstream 0.5kb downstream 4508 true scaffold_10r: 5113846-5118353 Theobroma cacao
Thecc1EG043307 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 5113846-5114345 Theobroma cacao
Thecc1EG043307 1.0kb upstream 1.0kb upstream 5008 true scaffold_10r: 5114346-5119353 Theobroma cacao
Thecc1EG043307 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 5118354-5119353 Theobroma cacao
Thecc1EG043307 1.0kb downstream 1.0kb downstream 5008 true scaffold_10r: 5113346-5118353 Theobroma cacao
Thecc1EG043307 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 5113346-5114345 Theobroma cacao
Thecc1EG043307 2.0kb upstream 2.0kb upstream 6008 true scaffold_10r: 5114346-5120353 Theobroma cacao
Thecc1EG043307 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 5118354-5120353 Theobroma cacao
Thecc1EG043307 2.0kb downstream 2.0kb downstream 6008 true scaffold_10r: 5112346-5118353 Theobroma cacao
Thecc1EG043307 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 5112346-5114345 Theobroma cacao
Thecc1EG043307 5.0kb upstream 5.0kb upstream 9008 true scaffold_10r: 5114346-5123353 Theobroma cacao
Thecc1EG043307 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 5118354-5123353 Theobroma cacao
Thecc1EG043307 5.0kb downstream 5.0kb downstream 9008 true scaffold_10r: 5109346-5118353 Theobroma cacao
Thecc1EG043307 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 5109346-5114345 Theobroma cacao
Thecc1EG043307 10.0kb upstream 10.0kb upstream 14008 true scaffold_10r: 5114346-5128353 Theobroma cacao
Thecc1EG043307 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 5118354-5128353 Theobroma cacao
Thecc1EG043307 10.0kb downstream 10.0kb downstream 14008 true scaffold_10r: 5104346-5118353 Theobroma cacao
Thecc1EG043307 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 5104346-5114345 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837970 5264 Brassicales-Malvales View MSA
124347844 5266 SBM View MSA
124241792 5268 Malvidae View MSA
124061902 5270 Rosid View MSA
123738683 5271 Pentapetalae View MSA
122794926 5272 Eudicot View MSA
122046705 5273 Angiosperm View MSA
121350919 5274 Embryophyte View MSA
123427777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain