Gene : Thecc1EG042688 T. cacao v1.1

Defline:  (1 of 1) PTHR10826//PTHR10826:SF4 - COMPLEMENT COMPONENT 1 // GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  325
Name:  ? Thecc1EG042688 Secondary Identifier:  ? PAC:27442588

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042688 0.5kb upstream 0.5kb upstream 2282 true scaffold_10r: 1803797-1806078 Theobroma cacao
Thecc1EG042688 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1805579-1806078 Theobroma cacao
Thecc1EG042688 0.5kb downstream 0.5kb downstream 2282 true scaffold_10r: 1803297-1805578 Theobroma cacao
Thecc1EG042688 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1803297-1803796 Theobroma cacao
Thecc1EG042688 1.0kb upstream 1.0kb upstream 2782 true scaffold_10r: 1803797-1806578 Theobroma cacao
Thecc1EG042688 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1805579-1806578 Theobroma cacao
Thecc1EG042688 1.0kb downstream 1.0kb downstream 2782 true scaffold_10r: 1802797-1805578 Theobroma cacao
Thecc1EG042688 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1802797-1803796 Theobroma cacao
Thecc1EG042688 2.0kb upstream 2.0kb upstream 3782 true scaffold_10r: 1803797-1807578 Theobroma cacao
Thecc1EG042688 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1805579-1807578 Theobroma cacao
Thecc1EG042688 2.0kb downstream 2.0kb downstream 3782 true scaffold_10r: 1801797-1805578 Theobroma cacao
Thecc1EG042688 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1801797-1803796 Theobroma cacao
Thecc1EG042688 5.0kb upstream 5.0kb upstream 6782 true scaffold_10r: 1803797-1810578 Theobroma cacao
Thecc1EG042688 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1805579-1810578 Theobroma cacao
Thecc1EG042688 5.0kb downstream 5.0kb downstream 6782 true scaffold_10r: 1798797-1805578 Theobroma cacao
Thecc1EG042688 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1798797-1803796 Theobroma cacao
Thecc1EG042688 10.0kb upstream 10.0kb upstream 11782 true scaffold_10r: 1803797-1815578 Theobroma cacao
Thecc1EG042688 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1805579-1815578 Theobroma cacao
Thecc1EG042688 10.0kb downstream 10.0kb downstream 11782 true scaffold_10r: 1793797-1805578 Theobroma cacao
Thecc1EG042688 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1793797-1803796 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839135 5264 Brassicales-Malvales View MSA
124344298 5266 SBM View MSA
124237889 5268 Malvidae View MSA
124063426 5270 Rosid View MSA
123740355 5271 Pentapetalae View MSA
122797199 5272 Eudicot View MSA
122041854 5273 Angiosperm View MSA
121348815 5274 Embryophyte View MSA
123426635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain