Gene : Thecc1EG042605 T. cacao v1.1
Defline:  (1 of 1) PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  251
Name:  ? Thecc1EG042605 Secondary Identifier:  ? PAC:27442363
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042605 0.5kb upstream 0.5kb upstream 7280 true scaffold_10r: 1407095-1414374 Theobroma cacao
Thecc1EG042605 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 1413875-1414374 Theobroma cacao
Thecc1EG042605 0.5kb downstream 0.5kb downstream 7280 true scaffold_10r: 1406595-1413874 Theobroma cacao
Thecc1EG042605 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 1406595-1407094 Theobroma cacao
Thecc1EG042605 1.0kb upstream 1.0kb upstream 7780 true scaffold_10r: 1407095-1414874 Theobroma cacao
Thecc1EG042605 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 1413875-1414874 Theobroma cacao
Thecc1EG042605 1.0kb downstream 1.0kb downstream 7780 true scaffold_10r: 1406095-1413874 Theobroma cacao
Thecc1EG042605 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 1406095-1407094 Theobroma cacao
Thecc1EG042605 2.0kb upstream 2.0kb upstream 8780 true scaffold_10r: 1407095-1415874 Theobroma cacao
Thecc1EG042605 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 1413875-1415874 Theobroma cacao
Thecc1EG042605 2.0kb downstream 2.0kb downstream 8780 true scaffold_10r: 1405095-1413874 Theobroma cacao
Thecc1EG042605 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 1405095-1407094 Theobroma cacao
Thecc1EG042605 5.0kb upstream 5.0kb upstream 11780 true scaffold_10r: 1407095-1418874 Theobroma cacao
Thecc1EG042605 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 1413875-1418874 Theobroma cacao
Thecc1EG042605 5.0kb downstream 5.0kb downstream 11780 true scaffold_10r: 1402095-1413874 Theobroma cacao
Thecc1EG042605 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 1402095-1407094 Theobroma cacao
Thecc1EG042605 10.0kb upstream 10.0kb upstream 16780 true scaffold_10r: 1407095-1423874 Theobroma cacao
Thecc1EG042605 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 1413875-1423874 Theobroma cacao
Thecc1EG042605 10.0kb downstream 10.0kb downstream 16780 true scaffold_10r: 1397095-1413874 Theobroma cacao
Thecc1EG042605 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 1397095-1407094 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779717 5273 Angiosperm View MSA
123837948 5264 Brassicales-Malvales View MSA
124348390 5266 SBM View MSA
124245953 5268 Malvidae View MSA
124070050 5270 Rosid View MSA
123743966 5271 Pentapetalae View MSA
122770838 5272 Eudicot View MSA
121051361 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain