Gene : Thecc1EG005468 T. cacao v1.1
Defline:  (1 of 1) PTHR23024//PTHR23024:SF212 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  3685
Name:  ? Thecc1EG005468 Secondary Identifier:  ? PAC:27433343
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6303 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005468 0.5kb upstream 0.5kb upstream 1912 true scaffold_1: 36780365-36782276 Theobroma cacao
Thecc1EG005468 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36780365-36780864 Theobroma cacao
Thecc1EG005468 0.5kb downstream 0.5kb downstream 1912 true scaffold_1: 36780865-36782776 Theobroma cacao
Thecc1EG005468 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36782277-36782776 Theobroma cacao
Thecc1EG005468 1.0kb upstream 1.0kb upstream 2412 true scaffold_1: 36779865-36782276 Theobroma cacao
Thecc1EG005468 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36779865-36780864 Theobroma cacao
Thecc1EG005468 1.0kb downstream 1.0kb downstream 2412 true scaffold_1: 36780865-36783276 Theobroma cacao
Thecc1EG005468 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36782277-36783276 Theobroma cacao
Thecc1EG005468 2.0kb upstream 2.0kb upstream 3412 true scaffold_1: 36778865-36782276 Theobroma cacao
Thecc1EG005468 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36778865-36780864 Theobroma cacao
Thecc1EG005468 2.0kb downstream 2.0kb downstream 3412 true scaffold_1: 36780865-36784276 Theobroma cacao
Thecc1EG005468 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36782277-36784276 Theobroma cacao
Thecc1EG005468 5.0kb upstream 5.0kb upstream 6412 true scaffold_1: 36775865-36782276 Theobroma cacao
Thecc1EG005468 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36775865-36780864 Theobroma cacao
Thecc1EG005468 5.0kb downstream 5.0kb downstream 6412 true scaffold_1: 36780865-36787276 Theobroma cacao
Thecc1EG005468 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36782277-36787276 Theobroma cacao
Thecc1EG005468 10.0kb upstream 10.0kb upstream 11412 true scaffold_1: 36770865-36782276 Theobroma cacao
Thecc1EG005468 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36770865-36780864 Theobroma cacao
Thecc1EG005468 10.0kb downstream 10.0kb downstream 11412 true scaffold_1: 36780865-36792276 Theobroma cacao
Thecc1EG005468 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36782277-36792276 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040959 5273 Angiosperm View MSA
123828832 5264 Brassicales-Malvales View MSA
124343255 5266 SBM View MSA
124244838 5268 Malvidae View MSA
124067894 5270 Rosid View MSA
123744138 5271 Pentapetalae View MSA
122796188 5272 Eudicot View MSA
121309778 5274 Embryophyte View MSA
123347440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain