Gene : Thecc1EG005543 T. cacao v1.1
Defline:  (1 of 1) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Genomic Order:  3755
Name:  ? Thecc1EG005543 Secondary Identifier:  ? PAC:27431871
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005543 0.5kb upstream 0.5kb upstream 4011 true scaffold_1: 37148876-37152886 Theobroma cacao
Thecc1EG005543 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37148876-37149375 Theobroma cacao
Thecc1EG005543 0.5kb downstream 0.5kb downstream 4011 true scaffold_1: 37149376-37153386 Theobroma cacao
Thecc1EG005543 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37152887-37153386 Theobroma cacao
Thecc1EG005543 1.0kb upstream 1.0kb upstream 4511 true scaffold_1: 37148376-37152886 Theobroma cacao
Thecc1EG005543 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37148376-37149375 Theobroma cacao
Thecc1EG005543 1.0kb downstream 1.0kb downstream 4511 true scaffold_1: 37149376-37153886 Theobroma cacao
Thecc1EG005543 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37152887-37153886 Theobroma cacao
Thecc1EG005543 2.0kb upstream 2.0kb upstream 5511 true scaffold_1: 37147376-37152886 Theobroma cacao
Thecc1EG005543 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37147376-37149375 Theobroma cacao
Thecc1EG005543 2.0kb downstream 2.0kb downstream 5511 true scaffold_1: 37149376-37154886 Theobroma cacao
Thecc1EG005543 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37152887-37154886 Theobroma cacao
Thecc1EG005543 5.0kb upstream 5.0kb upstream 8511 true scaffold_1: 37144376-37152886 Theobroma cacao
Thecc1EG005543 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37144376-37149375 Theobroma cacao
Thecc1EG005543 5.0kb downstream 5.0kb downstream 8511 true scaffold_1: 37149376-37157886 Theobroma cacao
Thecc1EG005543 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37152887-37157886 Theobroma cacao
Thecc1EG005543 10.0kb upstream 10.0kb upstream 13511 true scaffold_1: 37139376-37152886 Theobroma cacao
Thecc1EG005543 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37139376-37149375 Theobroma cacao
Thecc1EG005543 10.0kb downstream 10.0kb downstream 13511 true scaffold_1: 37149376-37162886 Theobroma cacao
Thecc1EG005543 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37152887-37162886 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832667 5264 Brassicales-Malvales View MSA
124337029 5266 SBM View MSA
124245744 5268 Malvidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain