Gene : Thecc1EG004744 T. cacao v1.1
Defline:  (1 of 1) K00770 - 1,4-beta-D-xylan synthase (E2.4.2.24) Genomic Order:  3061
Name:  ? Thecc1EG004744 Secondary Identifier:  ? PAC:27433815
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5800 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004744 0.5kb upstream 0.5kb upstream 5595 true scaffold_1: 33256296-33261890 Theobroma cacao
Thecc1EG004744 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 33256296-33256795 Theobroma cacao
Thecc1EG004744 0.5kb downstream 0.5kb downstream 5595 true scaffold_1: 33256796-33262390 Theobroma cacao
Thecc1EG004744 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 33261891-33262390 Theobroma cacao
Thecc1EG004744 1.0kb upstream 1.0kb upstream 6095 true scaffold_1: 33255796-33261890 Theobroma cacao
Thecc1EG004744 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 33255796-33256795 Theobroma cacao
Thecc1EG004744 1.0kb downstream 1.0kb downstream 6095 true scaffold_1: 33256796-33262890 Theobroma cacao
Thecc1EG004744 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 33261891-33262890 Theobroma cacao
Thecc1EG004744 2.0kb upstream 2.0kb upstream 7095 true scaffold_1: 33254796-33261890 Theobroma cacao
Thecc1EG004744 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 33254796-33256795 Theobroma cacao
Thecc1EG004744 2.0kb downstream 2.0kb downstream 7095 true scaffold_1: 33256796-33263890 Theobroma cacao
Thecc1EG004744 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 33261891-33263890 Theobroma cacao
Thecc1EG004744 5.0kb upstream 5.0kb upstream 10095 true scaffold_1: 33251796-33261890 Theobroma cacao
Thecc1EG004744 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 33251796-33256795 Theobroma cacao
Thecc1EG004744 5.0kb downstream 5.0kb downstream 10095 true scaffold_1: 33256796-33266890 Theobroma cacao
Thecc1EG004744 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 33261891-33266890 Theobroma cacao
Thecc1EG004744 10.0kb upstream 10.0kb upstream 15095 true scaffold_1: 33246796-33261890 Theobroma cacao
Thecc1EG004744 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 33246796-33256795 Theobroma cacao
Thecc1EG004744 10.0kb downstream 10.0kb downstream 15095 true scaffold_1: 33256796-33271890 Theobroma cacao
Thecc1EG004744 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 33261891-33271890 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026260 5273 Angiosperm View MSA
123829364 5264 Brassicales-Malvales View MSA
124345199 5266 SBM View MSA
124243165 5268 Malvidae View MSA
124063040 5270 Rosid View MSA
123737922 5271 Pentapetalae View MSA
122793059 5272 Eudicot View MSA
121296250 5274 Embryophyte View MSA
123334447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain