Gene : Thecc1EG004280 T. cacao v1.1
Defline:  (1 of 1) PTHR23083//PTHR23083:SF430 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Genomic Order:  2702
Name:  ? Thecc1EG004280 Secondary Identifier:  ? PAC:27436952
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG004280 0.5kb upstream 0.5kb upstream 5958 true scaffold_1: 30732003-30737960 Theobroma cacao
Thecc1EG004280 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 30737461-30737960 Theobroma cacao
Thecc1EG004280 0.5kb downstream 0.5kb downstream 5958 true scaffold_1: 30731503-30737460 Theobroma cacao
Thecc1EG004280 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 30731503-30732002 Theobroma cacao
Thecc1EG004280 1.0kb upstream 1.0kb upstream 6458 true scaffold_1: 30732003-30738460 Theobroma cacao
Thecc1EG004280 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 30737461-30738460 Theobroma cacao
Thecc1EG004280 1.0kb downstream 1.0kb downstream 6458 true scaffold_1: 30731003-30737460 Theobroma cacao
Thecc1EG004280 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 30731003-30732002 Theobroma cacao
Thecc1EG004280 2.0kb upstream 2.0kb upstream 7458 true scaffold_1: 30732003-30739460 Theobroma cacao
Thecc1EG004280 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 30737461-30739460 Theobroma cacao
Thecc1EG004280 2.0kb downstream 2.0kb downstream 7458 true scaffold_1: 30730003-30737460 Theobroma cacao
Thecc1EG004280 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 30730003-30732002 Theobroma cacao
Thecc1EG004280 5.0kb upstream 5.0kb upstream 10458 true scaffold_1: 30732003-30742460 Theobroma cacao
Thecc1EG004280 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 30737461-30742460 Theobroma cacao
Thecc1EG004280 5.0kb downstream 5.0kb downstream 10458 true scaffold_1: 30727003-30737460 Theobroma cacao
Thecc1EG004280 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 30727003-30732002 Theobroma cacao
Thecc1EG004280 10.0kb upstream 10.0kb upstream 15458 true scaffold_1: 30732003-30747460 Theobroma cacao
Thecc1EG004280 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 30737461-30747460 Theobroma cacao
Thecc1EG004280 10.0kb downstream 10.0kb downstream 15458 true scaffold_1: 30722003-30737460 Theobroma cacao
Thecc1EG004280 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 30722003-30732002 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832493 5264 Brassicales-Malvales View MSA
124345479 5266 SBM View MSA
124253364 5268 Malvidae View MSA
124067211 5270 Rosid View MSA
123736449 5271 Pentapetalae View MSA
122791589 5272 Eudicot View MSA
122042735 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain